RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 TMEM9Q9P0T7 183 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 MAGED1Q9Y5V3 778 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 B3GALT1Q9Y5Z6 326 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 ATRXP46100 2492 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 ANKRD12Q6UB98 2062 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR5K3A6NET4 321 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 H7BY64 318 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 BTN3A3O00478 584 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 HPRP00739 348 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 HEXBP07686 556 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 IMPDH2P12268 514 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 CDH1P12830 882 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 HTR6P50406 440 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 CLCA4Q14CN2 919 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 CTF1Q16619 201 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 LRRC23Q53EV4 343 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 XKR6Q5GH73 641 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF773Q6PK81 442 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 ABRAXAS1Q6UWZ7 409 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 FAM20CQ8IXL6 584 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 CAMKVQ8NCB2 501 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR52B6Q8NGF0 335 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 STAG3L4Q8TBR4 150 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 TM9SF4Q92544 642 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 PRAP1Q96NZ9 151 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 CXorf21Q9HAI6 301 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF71Q9NQZ8 489 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 INIPQ9NRY2 104 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 ERVK-11Q9UQG0 969 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 POLHQ9Y253 713 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 PPIL1Q9Y3C6 166 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 MAU2Q9Y6X3 613 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 PMF1-BGLAPU3KQ54 211 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 PIKFYVEQ9Y2I7 2098 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 CKAP5Q14008 2032 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 A0A0J9YY10 115 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 LILRA5A6NI73 299 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF891A8MT65 544 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 CLDN4O14493 209 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 HOXB3P14651 431 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 CAPZBP47756 277 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 TMBIM6P55061 237 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 ISL1P61371 349 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 NAA20P61599 178 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 NFATC3Q12968 1075 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 KIR2DS3Q14952 304 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 AP5B1Q2VPB7 878 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 PROX2Q3B8N5 592 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 METRNLQ641Q3 311 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 DDIASQ8IXT1 998 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 C1orf216Q8TAB5 229 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 CHPT1Q8WUD6 406 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 GTF2H4Q92759 462 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 UBE2E3Q969T4 207 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 FCRL1Q96LA6 429 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 C19orf43Q9BQ61 176 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 CRB3Q9BUF7 120 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 OSBPL10Q9BXB5 764 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 ELOVL6Q9H5J4 265 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 TIMM22Q9Y584 194 aa7.03□□□□□ -1.28
CDC42BPA-208ENST00000442054 USP34Q70CQ2 3546 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 TRBV5-4A0A0C4DH59 114 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 PRAMEF33A0A0G2JMD5 474 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 AGAP14A8MT82 685 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 M0QX08 132 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 EBLN1P0CF75 366 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 FASP25445 335 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 TLX1P31314 330 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 CD97P48960 835 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 ALDH3A2P51648 485 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 POLR2JP52435 117 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 RRADP55042 308 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 STX4Q12846 297 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 GBX1Q14549 363 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC2A7Q6PXP3 512 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 DCDC5Q6ZRR9 648 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 CROCCP3Q8IVE0 287 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 MCATQ8IVS2 390 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 CHDHQ8NE62 594 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 PNPT1Q8TCS8 783 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 UBTD2Q8WUN7 234 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 MUL1Q969V5 352 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 CCDC138Q96M89 665 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 MUS81Q96NY9 551 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 KIR3DX1Q9H7L2 352 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 PLGRKTQ9HBL7 147 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 GIMAP4Q9NUV9 329 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 FBXW2Q9UKT8 454 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 A0A1W2PPW3 197 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 ARGFXA6NJG6 315 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 FUCA1P04066 466 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 CD63P08962 238 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 ELK4P28324 431 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 GP2P55259 537 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 FOXD4Q12950 439 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 SMU1Q2TAY7 513 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 C18orf21Q32NC0 220 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF829Q3KNS6 432 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 FBXO48Q5FWF7 155 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 CCNYL2Q5T2Q4 361 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms