RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 POP5Q969H6 163 aaKnown RBP16.05■□□□□ 0.16
PMS1-213ENST00000441310 IGSF21Q96ID5 467 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 MSLNLQ96KJ4 702 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 SAV1Q9H4B6 383 aaPredicted RBP16.05■□□□□ 0.16
PMS1-213ENST00000441310 BPIFA1Q9NP55 256 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 GMEB2Q9UKD1 530 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 MRPS7Q9Y2R9 242 aaKnown RBP16.05■□□□□ 0.16
PMS1-213ENST00000441310 COL4A4P53420 1690 aaPredicted RBP16.05■□□□□ 0.16
PMS1-213ENST00000441310 A0A0A6YYJ9 748 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 PITPNM1O00562 1244 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 PRRG1O14668 218 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 HCN1O60741 890 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 B3GALNT1O75752 331 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 STC2O76061 302 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 KCNK5O95279 499 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 MPC2O95563 127 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 OTCP00480 354 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 HMGA1P17096 107 aaKnown RBP16.05■□□□□ 0.16
PMS1-213ENST00000441310 AGFG1P52594 562 aaKnown RBP16.05■□□□□ 0.16
PMS1-213ENST00000441310 RING1Q06587 406 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 TUSC1Q2TAM9 212 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 TMIGD1Q6UXZ0 262 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 TRILQ7L0X0 811 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 PGBD3Q8N328 593 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 CDKN2AIPNLQ96HQ2 116 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 C7orf34Q96L11 122 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 CINPQ9BW66 212 aaPredicted RBP16.05■□□□□ 0.16
PMS1-213ENST00000441310 PIGUQ9H490 435 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 SLC28A3Q9HAS3 691 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 TXNL4BQ9NX01 149 aaKnown RBP16.05■□□□□ 0.16
PMS1-213ENST00000441310 TRPM5Q9NZQ8 1165 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 YARS2Q9Y2Z4 477 aaKnown RBP16.05■□□□□ 0.16
PMS1-213ENST00000441310 HRH3Q9Y5N1 445 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 ULK1O75385 1050 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 OPN1SWP03999 348 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 RHOCP08134 193 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 OGNP20774 298 aaKnown RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 YBEYP58557 167 aaPredicted RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 RPS14P62263 151 aaKnown RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 SPIBQ01892 262 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 ZNF273Q14593 569 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 IGSF11Q5DX21 431 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 TAGAPQ8N103 731 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 ZNF655Q8N720 491 aaPredicted RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 OR6M1Q8NGM8 313 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 GPR150Q8NGU9 434 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 OR6K2Q8NGY2 324 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 KLHL6Q8WZ60 621 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 ZC3HAV1LQ96H79 300 aaKnown RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 CLN6Q9NWW5 311 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 DOCK6Q96HP0 2047 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 CDH23Q9H251 3354 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 HOXA2O43364 376 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 HRGP04196 525 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 NUDT7P0C024 238 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 TACR1P25103 407 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 OR1E2P47887 323 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 CDC42P60953 191 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 RPL6Q02878 288 aaKnown RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 DGKKQ5KSL6 1271 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 RNF219Q5W0B1 726 aaPredicted RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 SLC8B1Q6J4K2 584 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 SGTBQ96EQ0 304 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 SORCS2Q96PQ0 1159 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 NSUN3Q9H649 340 aaKnown RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 POFUT2Q9Y2G5 429 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 LOC285095A0A1B0GVY8 99 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 HPGDSO60760 199 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 CPSF4O95639 269 aaKnown RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 SYPP08247 313 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 ITGALP20701 1170 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 ZXDBP98169 803 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 ZNF177Q13360 481 aaPredicted RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 PTGES3Q15185 160 aaKnown RBP16.04■□□□□ 0.16
PMS1-213ENST00000441310 EXOC3L2Q2M3D2 409 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 COL28A1Q2UY09 1125 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 BHLHB9Q6PI77 547 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 GHDCQ8N2G8 530 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 RBP7Q96R05 134 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 SLC35C2Q9NQQ7 365 aa16.04■□□□□ 0.16
PMS1-213ENST00000441310 TRAV6A0A075B6T7 132 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 GPR39O43194 453 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 HBQ1P09105 142 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 UGT8Q16880 541 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 GDPGP1Q6ZNW5 385 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 PTOV1Q86YD1 416 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 CARNMT1Q8N4J0 409 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 OR4K2Q8NGD2 314 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 MCOLN1Q9GZU1 580 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 DNAJC27Q9NZQ0 273 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 PPT2Q9UMR5 302 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 SUV39H1O43463 412 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 ENTPD6O75354 484 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 ACSM4P0C7M7 580 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 NNMTP40261 264 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 MAPKAPK2P49137 400 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 KCNJ10P78508 379 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 TWF1Q12792 350 aa16.03■□□□□ 0.16
PMS1-213ENST00000441310 TTLL9Q3SXZ7 439 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms