RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SNRNP27Q8WVK2 155 aaKnown RBP11.58□□□□□ -0.56
NEK1-201ENST00000439128 CPNE2Q96FN4 548 aaPredicted RBP11.58□□□□□ -0.56
NEK1-201ENST00000439128 LRCH3Q96II8 777 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 MYADMQ96S97 322 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 PDCD5O14737 125 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 GPIP06744 558 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 PGAM2P15259 253 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 POU3F2P20265 443 aaPredicted RBP11.58□□□□□ -0.56
NEK1-201ENST00000439128 MAGP20916 626 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 CD27P26842 260 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 ACSL1P33121 698 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 GGT2P36268 569 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 ABCA11PQ4W5N1 156 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 CCDC92Q53HC0 331 aaPredicted RBP11.58□□□□□ -0.56
NEK1-201ENST00000439128 RAB6CQ53S08 254 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 EEF1A1P5Q5VTE0 462 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 PDZD3Q86UT5 571 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 TP53INP2Q8IXH6 220 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 FER1L6-AS2Q96M78 137 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 CDC6Q99741 560 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 MGME1Q9BQP7 344 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 CHID1Q9BWS9 393 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 RAB6CQ9H0N0 254 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 CACNA1FO60840 1977 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 FAM155AB1AL88 458 aaPredicted RBP11.58□□□□□ -0.56
NEK1-201ENST00000439128 FTCDNL1E5RQL4 147 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 PGRP06401 933 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 OR3A3P47888 321 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 OR3A2P47893 321 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 MADCAM1Q13477 382 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 TLDC1Q6P9B6 456 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 LINC00696Q6ZRV3 163 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 ZADH2Q8N4Q0 377 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 TRMT10AQ8TBZ6 339 aaKnown RBP11.58□□□□□ -0.56
NEK1-201ENST00000439128 PEX13Q92968 403 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 CGREF1Q99674 301 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 TM9SF2Q99805 663 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 SMURF1Q9HCE7 757 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 OBP2AQ9NY56 170 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 LAMP5Q9UJQ1 280 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 KCND3Q9UK17 655 aa11.58□□□□□ -0.56
NEK1-201ENST00000439128 MCTS1Q9ULC4 181 aaKnown RBP11.58□□□□□ -0.56
NEK1-201ENST00000439128 F3P13726 295 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 LEPRP48357 1165 aaKnown RBP11.57□□□□□ -0.56
NEK1-201ENST00000439128 LRIT3Q3SXY7 679 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 LIN52Q52LA3 116 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 FAM160A2Q8N612 972 aaPredicted RBP11.57□□□□□ -0.56
NEK1-201ENST00000439128 HUS1BQ8NHY5 278 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 BBS10Q8TAM1 723 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 OMA1Q96E52 524 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 FCRL3Q96P31 734 aaPredicted RBP11.57□□□□□ -0.56
NEK1-201ENST00000439128 KLHL31Q9H511 634 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 PNPLA3Q9NST1 481 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 TTLL8A6PVC2 850 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 PLOD3O60568 738 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 CD1DP15813 335 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 PRDX6P30041 224 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 MGAT3Q09327 533 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 NPTX1Q15818 432 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 MSS51Q4VC12 460 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 TMEM214Q6NUQ4 689 aaKnown RBP11.57□□□□□ -0.56
NEK1-201ENST00000439128 FAM131AQ6UXB0 335 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 JAGN1Q8N5M9 183 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 RBM15BQ8NDT2 890 aaKnown RBP11.57□□□□□ -0.56
NEK1-201ENST00000439128 SPRYD4Q8WW59 207 aaPredicted RBP11.57□□□□□ -0.56
NEK1-201ENST00000439128 TMEM168Q9H0V1 697 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 PAK6Q9NQU5 681 aaPredicted RBP11.57□□□□□ -0.56
NEK1-201ENST00000439128 LRCH1Q9Y2L9 728 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 CERS1P27544 350 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 PDK3Q15120 406 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 DGLUCYQ7Z3D6 616 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 TMEM139Q8IV31 216 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 CLIP4Q8N3C7 705 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 C11orf24Q96F05 449 aaPredicted RBP11.57□□□□□ -0.56
NEK1-201ENST00000439128 PIGUQ9H490 435 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 SP140LQ9H930 580 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 RHCGQ9UBD6 479 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 TBX21Q9UL17 535 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 MYH1P12882 1939 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 UBR2Q8IWV8 1755 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 ZNF878C9JN71 531 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 ANGPTL1O95841 491 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 DRD2P14416 443 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 FANK1Q8TC84 345 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 CREB3L4Q8TEY5 395 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 PCDHB10Q9UN67 800 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 CCDC88AQ3V6T2 1871 aa11.57□□□□□ -0.56
NEK1-201ENST00000439128 ISPDA4D126 451 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 HTR3EA5X5Y0 456 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 ATE1O95260 518 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 F11P03951 625 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 RAP2AP10114 183 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 PSMA1P25786 263 aaKnown RBP11.56□□□□□ -0.56
NEK1-201ENST00000439128 VASPP50552 380 aaPredicted RBP11.56□□□□□ -0.56
NEK1-201ENST00000439128 IER5LQ5T953 404 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 GPR26Q8NDV2 337 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 OR6N2Q8NGY6 317 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 UFD1Q92890 307 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 BORCS6Q96GS4 357 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 COPS4Q9BT78 406 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms