RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 TTLL9Q3SXZ7 439 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 FBXL19-AS1Q494R0 122 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 ANKRD39Q53RE8 183 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 RTL6Q6ICC9 239 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 CAPN13Q6MZZ7 669 aaPredicted RBP7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 ZNF585AQ6P3V2 769 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 MDGA2Q7Z553 956 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 SLC26A11Q86WA9 606 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 CNGA4Q8IV77 575 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 LIX1LQ8IVB5 337 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 REXO1L1PQ8IX06 675 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 APCDD1LQ8NCL9 501 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 PPFIBP2Q8ND30 876 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 OR5M9Q8NGP3 310 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 SLC35B2Q8TB61 432 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 ZCCHC10Q8TBK6 192 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 LPGAT1Q92604 370 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 SARAFQ96BY9 339 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 PWWP2AQ96N64 755 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 JMJD8Q96S16 334 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 MACROD1Q9BQ69 325 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 IL22Q9GZX6 179 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 TNFRSF12AQ9NP84 129 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 CCDC177Q9NQR7 707 aaPredicted RBP7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 CHRAC1Q9NRG0 131 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 TREX1Q9NSU2 369 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 BEX4Q9NWD9 120 aaPredicted RBP7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 KLHL42Q9P2K6 505 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 ACAD8Q9UKU7 415 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 PPIEQ9UNP9 301 aaKnown RBP7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 ERVK-11Q9UQG0 969 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 PCDHGB3Q9Y5G1 929 aa7.79□□□□□ -1.16
NIF3L1-208ENST00000436412 IGKV3D-11A0A0A0MRZ8 115 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 TRBV11-1A0A0K0K1C0 115 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 TCRBV16S1A1N1A0A5B0 115 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 HSPB2A8KAH6 182 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 A8MVJ9 347 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 E5RI56 91 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 GFYI3L273 518 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 AP3B1O00203 1094 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 AQP7O14520 342 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 DVL2O14641 736 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 CHST10O43529 356 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 GALR3O60755 368 aaPredicted RBP7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 B4GALT2O60909 372 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 NIPSNAP2O75323 286 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 GLSO94925 669 aaPredicted RBP7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 SYF2O95926 243 aaKnown RBP7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 MPC1LP0DKB6 136 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 IMPDH2P12268 514 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 ENO3P13929 434 aaPredicted RBP7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 PRKCAP17252 672 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 ALOX12P18054 663 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 PI3P19957 117 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 ENDOUP21128 410 aaKnown RBP7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 CCND1P24385 295 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 UQCRC1P31930 480 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 GRIA1P42261 906 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 HSPB2Q16082 182 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 TYSND1Q2T9J0 566 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 ZNF385BQ569K4 471 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 ACSBG2Q5FVE4 666 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 C1orf185Q5T7R7 199 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 WLSQ5T9L3 541 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 FBXW10Q5XX13 1052 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 TRILQ7L0X0 811 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 WDR53Q7Z5U6 358 aaPredicted RBP7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 FAM109AQ8N4B1 249 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 OTUD6BQ8N6M0 293 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 B3GNT7Q8NFL0 401 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 OR2M7Q8NG81 312 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 ALG3Q92685 438 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 RNASE6Q93091 150 aaKnown RBP7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 DACT3Q96B18 629 aaPredicted RBP7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 SIGLEC10Q96LC7 697 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 KCNC2Q96PR1 638 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 TM9SF2Q99805 663 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 CCDC77Q9BR77 488 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 TTTY12Q9BZ98 90 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 DMRT3Q9NQL9 472 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 DEPPQ9NTK1 212 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 ABCF3Q9NUQ8 709 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 HPF1Q9NWY4 346 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 FBXW2Q9UKT8 454 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 CBLCQ9ULV8 474 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 DRG1Q9Y295 367 aaKnown RBP7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 PCDHA13Q9Y5I0 950 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 EML6Q6ZMW3 1958 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 USF3Q68DE3 2245 aa7.78□□□□□ -1.16
NIF3L1-208ENST00000436412 NINQ8N4C6 2090 aa7.77□□□□□ -1.17
NIF3L1-208ENST00000436412 SYNDIG1LA6NDD5 238 aa7.77□□□□□ -1.17
NIF3L1-208ENST00000436412 ZNF860A6NHJ4 632 aa7.77□□□□□ -1.17
NIF3L1-208ENST00000436412 FAM166BA8MTA8 275 aa7.77□□□□□ -1.17
NIF3L1-208ENST00000436412 PSMD12O00232 456 aaPredicted RBP7.77□□□□□ -1.17
NIF3L1-208ENST00000436412 LCMT2O60294 686 aaKnown RBP7.77□□□□□ -1.17
NIF3L1-208ENST00000436412 HCN1O60741 890 aa7.77□□□□□ -1.17
NIF3L1-208ENST00000436412 ZFAND5O76080 213 aa7.77□□□□□ -1.17
NIF3L1-208ENST00000436412 LY6G6DO95868 133 aa7.77□□□□□ -1.17
NIF3L1-208ENST00000436412 FREM3P0C091 2139 aa7.77□□□□□ -1.17
NIF3L1-208ENST00000436412 RNH1P13489 461 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms