RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 GPC4O75487 556 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 RPP14O95059 124 aaKnown RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 PIGRP01833 764 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 HMGN1P05114 100 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CHRNGP07510 517 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 MMP10P09238 476 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CTXN2P0C2S0 81 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CPN1P15169 458 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CD22P20273 847 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 NDUFS1P28331 727 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CLDN2P57739 230 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 RGS8P57771 180 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 NLRP11P59045 1033 aaKnown RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 PPP2CBP62714 309 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 PPP2CAP67775 309 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 RHAGQ02094 409 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 IFFO1Q0D2I5 559 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 DNASE1L3Q13609 305 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 ITIH4Q14624 930 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 PRKD1Q15139 912 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 C18orf21Q32NC0 220 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 ACTBL2Q562R1 376 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CEP85LQ5SZL2 805 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CELF3Q5SZQ8 465 aaKnown RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 LAIR1Q6GTX8 287 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 SLC39A4Q6P5W5 647 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 TMEM71Q6P5X7 295 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 FAM198BQ6UWH4 519 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 FAM159AQ6UWV7 190 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 BTNL8Q6UX41 500 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 ASCL4Q6XD76 172 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 NUDCD3Q8IVD9 361 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 DCUN1D3Q8IWE4 304 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 ZNF683Q8IZ20 524 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 TMEM123Q8N131 208 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 LINC01356Q8N9X3 169 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 SRFBP1Q8NEF9 429 aaKnown RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 FAM83FQ8NEG4 500 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 ENGASEQ8NFI3 743 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 PROKR1Q8TCW9 393 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 ELMO1Q92556 727 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 COQ2Q96H96 371 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 EGLN2Q96KS0 407 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CCDC17Q96LX7 622 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CYP2S1Q96SQ9 504 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 MMS19Q96T76 1030 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 TMEM175Q9BSA9 504 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 FSD1LQ9BXM9 530 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 MEGF9Q9H1U4 602 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 TRIM45Q9H8W5 580 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 MYNNQ9NPC7 610 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 PXMP2Q9NR77 195 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 ABHD10Q9NUJ1 306 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 TXLNGQ9NUQ3 528 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 TMEM248Q9NWD8 314 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 APOBEC3BQ9UH17 382 aaKnown RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 SPATA2Q9UM82 520 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 GRIP1Q9Y3R0 1128 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CHST2Q9Y4C5 530 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 RNF115Q9Y4L5 304 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 KLK4Q9Y5K2 254 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.11□□□□□ -1.755e-8■□□□□ 10.7
PTPN12-206ENST00000435495 ARHGEF40Q8TER5 1519 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 POLR3AO14802 1390 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 GRIN2DO15399 1336 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 MN1Q10571 1320 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 TMEM129A0AVI4 362 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 FABP12A6NFH5 140 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 A6NNC1 897 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 P2RY10O00398 339 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 DSCR3O14972 297 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 FLRT2O43155 660 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 PSMD3O43242 534 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 TIMM8AO60220 97 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 LCMT2O60294 686 aaKnown RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 H6PDO95479 791 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CST1P01037 141 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 FABP1P07148 127 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 ERCC1P07992 297 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 FOSL2P15408 326 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 POLR2EP19388 210 aaKnown RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 EEF1B2P24534 225 aaKnown RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 GNA11P29992 359 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 EPHX2P34913 555 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 IER3P46695 156 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 CACNA2D1P54289 1103 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 RPS7P62081 194 aaKnown RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 PDK2Q15119 407 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 PTPRRQ15256 657 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 SBK1Q52WX2 424 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 KLHL22Q53GT1 634 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 SOWAHCQ53LP3 525 aaPredicted RBP4.11□□□□□ -1.75
PTPN12-206ENST00000435495 C20orf194Q5TEA3 1177 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 BSPRYQ5W0U4 402 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 ADNP2Q6IQ32 1131 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 UTS2BQ765I0 119 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 ARHGAP22Q7Z5H3 698 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 POLNQ7Z5Q5 900 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 NRARPQ7Z6K4 114 aa4.11□□□□□ -1.75
PTPN12-206ENST00000435495 ZC3HC1Q86WB0 502 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms