RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 STON2Q8WXE9 905 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 KAT2AQ92830 837 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 CMTM5Q96DZ9 223 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 SERPINI1Q99574 410 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 ECSITQ9BQ95 431 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 YIPF4Q9BSR8 244 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC25A37Q9NYZ2 338 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 KCMF1Q9P0J7 381 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 NEUROG3Q9Y4Z2 214 aa8.99□□□□□ -0.97
HMGCLL1-206ENST00000428842 MED13Q9UHV7 2174 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 CCDC154A6NI56 674 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 A8MUA0 341 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 CHST10O43529 356 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 FGF17O60258 216 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 GFRA3O60609 400 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 GALR3O60755 368 aaPredicted RBP8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 DNAJA2O60884 412 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 CSO75390 466 aaKnown RBP8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 C6orf47O95873 294 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 SNRPB2P08579 225 aaKnown RBP8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 FURINP09958 794 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 FTH1P19P0C7X4 201 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 RGS1Q08116 209 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 TARDBPQ13148 414 aaKnown RBP eCLIP8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 GAB1Q13480 694 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 CCNIQ14094 377 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 RCAN2Q14206 197 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 TLR1Q15399 786 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 PRTGQ2VWP7 1150 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 SPIN4Q56A73 249 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 METTL21CQ5VZV1 264 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 NUDT13Q86X67 352 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 TMEM126BQ8IUX1 230 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 MSRB3Q8IXL7 192 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 CHCHD4Q8N4Q1 142 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 FAM110BQ8TC76 370 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 JADE3Q92613 823 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 UBE2E3Q969T4 207 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 CLIP3Q96DZ5 547 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 ARSGQ96EG1 525 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 CNRIP1Q96F85 164 aaPredicted RBP8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 QRFPRQ96P65 431 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 DPYSL5Q9BPU6 564 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 DPH2Q9BQC3 489 aaPredicted RBP8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 KCNH6Q9H252 994 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 CLMPQ9H6B4 373 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 COPS7BQ9H9Q2 264 aaPredicted RBP8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 SERHLQ9NQF3 203 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 CUTCQ9NTM9 273 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 SCOCQ9UIL1 159 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 PLCL2Q9UPR0 1127 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 SNX8Q9Y5X2 465 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 ATRXP46100 2492 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 MED12Q93074 2177 aa8.98□□□□□ -0.97
HMGCLL1-206ENST00000428842 FXYD1O00168 92 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 MRASO14807 208 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 YKT6O15498 198 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 ALOX12BO75342 701 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SCRG1O75711 98 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SMIM10L1P0DMW3 83 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 CSTF2P33240 577 aaKnown RBP eCLIP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 XCR1P46094 333 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 NOVA1P51513 510 aaKnown RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 RPS18P62269 152 aaKnown RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 HBA1P69905 142 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SRSF6Q13247 344 aaKnown RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 MINDY4Q4G0A6 757 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 FAM71E1Q6IPT2 247 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 IZUMO2Q6UXV1 221 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 RNF111Q6ZNA4 994 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SPATA19Q7Z5L4 167 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 GPR180Q86V85 440 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 HPS6Q86YV9 775 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 DSELQ8IZU8 1212 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 CAMKVQ8NCB2 501 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 TSLPQ969D9 159 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SMIM10Q96HG1 83 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SARGQ9BW04 601 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 PCDHAC1Q9H158 963 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SOX17Q9H6I2 414 aaPredicted RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 DDX31Q9H8H2 851 aaKnown RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 MIEF1Q9NQG6 463 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 FOXJ2Q9P0K8 574 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 TRPC4Q9UBN4 977 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 UTS2RQ9UKP6 389 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 PTPRBP23467 1997 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 NPIPB8E9PQR5 432 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SCAMP2O15127 329 aaKnown RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 PROM1O43490 865 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SCN2BO60939 215 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 CNOT3O75175 753 aaKnown RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 SNUPNO95149 360 aaKnown RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 NUDT7P0C024 238 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZNF883P0CG24 379 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 CDK9P50750 372 aaKnown RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 PRKAG1P54619 331 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 CLDN8P56748 225 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 KCNK10P57789 538 aa8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 STXBP1P61764 594 aaKnown RBP8.97□□□□□ -0.97
HMGCLL1-206ENST00000428842 IRX1P78414 480 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms