RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 MSL3P1P0C860 447 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 CHI3L1P36222 383 aaPredicted RBP12.87□□□□□ -0.35
LRCH3-203ENST00000425562 GZMKP49863 264 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 SMSP52788 366 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 DOC2AQ14183 400 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 LAMTOR1Q6IAA8 161 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 TNFAIP8L2Q6P589 184 aaPredicted RBP12.87□□□□□ -0.35
LRCH3-203ENST00000425562 GLRX5Q86SX6 157 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 RNF180Q86T96 592 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 PHC2Q8IXK0 858 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 ARL14EPQ8N8R7 260 aaPredicted RBP12.87□□□□□ -0.35
LRCH3-203ENST00000425562 ZFAND1Q8TCF1 268 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 PMEPA1Q969W9 287 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 MSANTD3Q96H12 275 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 DCLRE1CQ96SD1 692 aaKnown RBP12.87□□□□□ -0.35
LRCH3-203ENST00000425562 TSSK6Q9BXA6 273 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 SLC29A3Q9BZD2 475 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.87□□□□□ -0.35
LRCH3-203ENST00000425562 TBC1D17Q9HA65 648 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 WASHC1A8K0Z3 465 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 SCG5P05408 212 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 ALAS2P22557 587 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 ACRV1P26436 265 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 MAPK1P28482 360 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 FAM205BPQ63HN1 556 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 TXNDC8Q6A555 127 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 CNIH2Q6PI25 160 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 BRAT1Q6PJG6 821 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 NPAS3Q8IXF0 933 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 C2orf73Q8N5S3 287 aaPredicted RBP12.87□□□□□ -0.35
LRCH3-203ENST00000425562 SPERTQ8NA61 448 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 PCSK9Q8NBP7 692 aaKnown RBP12.87□□□□□ -0.35
LRCH3-203ENST00000425562 RAB8BQ92930 207 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 ASIC4Q96FT7 647 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 NELL2Q99435 816 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 TAPBPLQ9BX59 468 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 HCN4Q9Y3Q4 1203 aa12.87□□□□□ -0.35
LRCH3-203ENST00000425562 A0A075B6Q4 140 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 C2orf92A0A1B0GVN3 265 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 CDK2AP1O14519 115 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 MRPS14O60783 128 aaKnown RBP12.86□□□□□ -0.35
LRCH3-203ENST00000425562 UBL4AP11441 157 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 ATF4P18848 351 aaPredicted RBP12.86□□□□□ -0.35
LRCH3-203ENST00000425562 SOX18P35713 384 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 MAP2K3P46734 347 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 STK19P49842 368 aaPredicted RBP12.86□□□□□ -0.35
LRCH3-203ENST00000425562 ZNF91Q05481 1191 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 SRSF11Q05519 484 aaKnown RBP12.86□□□□□ -0.35
LRCH3-203ENST00000425562 NAE1Q13564 534 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 SEC23BQ15437 767 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 FAM26DQ5JW98 314 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 IL20RBQ6UXL0 311 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 DEFB128Q7Z7B8 93 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.86□□□□□ -0.35
LRCH3-203ENST00000425562 SLC37A3Q8NCC5 494 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 CREB3L4Q8TEY5 395 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 REPS1Q96D71 796 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 ART5Q96L15 291 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 ZSCAN5AQ9BUG6 496 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 SORBS1Q9BX66 1292 aaKnown RBP12.86□□□□□ -0.35
LRCH3-203ENST00000425562 C3orf14Q9HBI5 128 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 STARD7Q9NQZ5 370 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 TRPM5Q9NZQ8 1165 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 PLEKHB1Q9UF11 243 aaPredicted RBP12.86□□□□□ -0.35
LRCH3-203ENST00000425562 ZNF222Q9UK12 451 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 LEUTXA8MZ59 168 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 ZNF670-ZNF695F2Z2N8 137 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 TEX46H3BTG2 121 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 TSPAN4O14817 238 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 CASKO14936 926 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 HMGA1P17096 107 aaKnown RBP12.86□□□□□ -0.35
LRCH3-203ENST00000425562 ETV5P41161 510 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 ETV1P50549 477 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 FCHO2Q0JRZ9 810 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 MRPL28Q13084 256 aaKnown RBP12.86□□□□□ -0.35
LRCH3-203ENST00000425562 SLC5A12Q1EHB4 618 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 GLYR1Q49A26 553 aaPredicted RBP12.86□□□□□ -0.35
LRCH3-203ENST00000425562 OR4C15Q8NGM1 316 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 SETD6Q8TBK2 473 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 RASSF5Q8WWW0 418 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 OTULINQ96BN8 352 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 SLC6A18Q96N87 628 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 TMED9Q9BVK6 235 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 CDCA4Q9BXL8 241 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 SGK2Q9HBY8 427 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 C5AR2Q9P296 337 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 ABT1Q9ULW3 272 aaKnown RBP12.86□□□□□ -0.35
LRCH3-203ENST00000425562 TRAPPC4Q9Y296 219 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 PADI2Q9Y2J8 665 aa12.86□□□□□ -0.35
LRCH3-203ENST00000425562 NTN1O95631 604 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 GJA1P17302 382 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 PBLDP30039 288 aaPredicted RBP12.85□□□□□ -0.35
LRCH3-203ENST00000425562 ERP29P30040 261 aaKnown RBP12.85□□□□□ -0.35
LRCH3-203ENST00000425562 RBBP4Q09028 425 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 GPNMBQ14956 572 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 SNAPC1Q16533 368 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 TOR1AIP1Q5JTV8 583 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 DDI2Q5TDH0 399 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 LCN1P1Q5VSP4 162 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 LHFPL3Q86UP9 236 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms