RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 AGAP6Q5VW22 663 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 ZNF544Q6NX49 715 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 C1orf122Q6ZSJ8 110 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 GET4Q7L5D6 327 aaPredicted RBP2.92□□□□□ -1.94
LINC01040-201ENST00000425048 SLC22A18ASQ8N1D0 253 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 ZNRF1Q8ND25 227 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 OR6F1Q8NGZ6 308 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 ZNF564Q8TBZ8 553 aaPredicted RBP2.92□□□□□ -1.94
LINC01040-201ENST00000425048 EXOC4Q96A65 974 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 ZHX3Q9H4I2 956 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 C10orf88Q9H8K7 445 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 NMUR1Q9HB89 426 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 PCDHGB4Q9UN71 923 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 MTF2Q9Y483 593 aaPredicted RBP2.92□□□□□ -1.94
LINC01040-201ENST00000425048 V9GYY5 206 aaPredicted RBP2.92□□□□□ -1.94
LINC01040-201ENST00000425048 NAIPQ13075 1403 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 UACAQ9BZF9 1416 aa2.92□□□□□ -1.94
LINC01040-201ENST00000425048 CFAP74Q9C0B2 1584 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 AQRO60306 1485 aaKnown RBP eCLIP2.91□□□□□ -1.94
LINC01040-201ENST00000425048 PLB1Q6P1J6 1458 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 RAPGEF2Q9Y4G8 1499 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 ANKRD36BQ8N2N9 1353 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 ATP8B1O43520 1251 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 SPRY1O43609 319 aaPredicted RBP2.91□□□□□ -1.94
LINC01040-201ENST00000425048 STAM2O75886 525 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 BEST1O76090 585 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 CELF2O95319 508 aaKnown RBP2.91□□□□□ -1.94
LINC01040-201ENST00000425048 IVLP07476 585 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 ASNSP08243 561 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 NR2C1P13056 603 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 PRKAR2BP31323 418 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 ALDH3B1P43353 468 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 CLNS1AP54105 237 aaKnown RBP2.91□□□□□ -1.94
LINC01040-201ENST00000425048 TPM4P67936 248 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 MECOMQ03112 1051 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 ARMC4Q5T2S8 1044 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 HHATQ5VTY9 493 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 SNRNP27Q8WVK2 155 aaKnown RBP2.91□□□□□ -1.94
LINC01040-201ENST00000425048 EVI5LQ96CN4 794 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 RBM18Q96H35 190 aaKnown RBP2.91□□□□□ -1.94
LINC01040-201ENST00000425048 ERO1AQ96HE7 468 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 ALKBH7Q9BT30 221 aaPredicted RBP2.91□□□□□ -1.94
LINC01040-201ENST00000425048 CWC25Q9NXE8 425 aaPredicted RBP2.91□□□□□ -1.94
LINC01040-201ENST00000425048 PRDM15P57071 1507 aaPredicted RBP2.91□□□□□ -1.94
LINC01040-201ENST00000425048 DISP1Q96F81 1524 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 PTPRGP23470 1445 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 KIF27Q86VH2 1401 aa2.91□□□□□ -1.94
LINC01040-201ENST00000425048 CDC42BPAQ5VT25 1732 aa2.9□□□□□ -1.94
LINC01040-201ENST00000425048 LRRC9Q6ZRR7 1453 aa2.9□□□□□ -1.94
LINC01040-201ENST00000425048 TEX14Q8IWB6 1497 aa2.9□□□□□ -1.94
LINC01040-201ENST00000425048 TOP2BQ02880 1626 aa2.9□□□□□ -1.94
LINC01040-201ENST00000425048 KIF14Q15058 1648 aa2.9□□□□□ -1.94
LINC01040-201ENST00000425048 SYCE3A1L190 88 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 PINLYPA6NC86 204 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 CCT8L1PA6NM43 557 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 TMCO5BA8MYB1 307 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 TMEM150CB9EJG8 249 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 E5RGE8 158 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 KIF2AO00139 706 aaPredicted RBP2.9□□□□□ -1.95
LINC01040-201ENST00000425048 MLNRO43193 412 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 LUC7L3O95232 432 aaKnown RBP2.9□□□□□ -1.95
LINC01040-201ENST00000425048 ADCY5O95622 1261 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 OAS2P29728 719 aaKnown RBP2.9□□□□□ -1.95
LINC01040-201ENST00000425048 IL10RBQ08334 325 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 IFT88Q13099 833 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 SNX1Q13596 522 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 ALCAMQ13740 583 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 SNTB1Q13884 538 aaKnown RBP2.9□□□□□ -1.95
LINC01040-201ENST00000425048 RASA2Q15283 850 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 C17orf58Q2M2W7 97 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 RFTN2Q52LD8 501 aaPredicted RBP2.9□□□□□ -1.95
LINC01040-201ENST00000425048 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.9□□□□□ -1.95
LINC01040-201ENST00000425048 ARMC3Q5W041 872 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 Q6P435 159 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 CWC27Q6UX04 472 aaKnown RBP2.9□□□□□ -1.95
LINC01040-201ENST00000425048 GBP6Q6ZN66 633 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 FBXO16Q8IX29 292 aaPredicted RBP2.9□□□□□ -1.95
LINC01040-201ENST00000425048 CCDC112Q8NEF3 446 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 TBCKQ8TEA7 893 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 LIPHQ8WWY8 451 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 SPSB1Q96BD6 273 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 LINC00615Q96LM1 132 aaPredicted RBP2.9□□□□□ -1.95
LINC01040-201ENST00000425048 CCT8L2Q96SF2 557 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 CTRCQ99895 268 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 CRACR2AQ9BSW2 395 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 TSPY26PQ9H489 355 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 PDRG1Q9NUG6 133 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 NCKAP1Q9Y2A7 1128 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 NSG2Q9Y328 171 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 SAMD9Q5K651 1589 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 MROH2BQ7Z745 1585 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 FYCO1Q9BQS8 1478 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 CLTCL1P53675 1640 aa2.9□□□□□ -1.95
LINC01040-201ENST00000425048 GPRASP1Q5JY77 1395 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.89□□□□□ -1.95
LINC01040-201ENST00000425048 TOP2AP11388 1531 aaKnown RBP2.89□□□□□ -1.95
LINC01040-201ENST00000425048 CUX1P39880 1505 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 ABCA10Q8WWZ4 1543 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 KDM5DQ9BY66 1539 aa2.89□□□□□ -1.95
LINC01040-201ENST00000425048 SYNMO15061 1565 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms