RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 ING2Q9H160 280 aa11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 ZNF160Q9HCG1 818 aa11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 PRDM9Q9NQV7 894 aa11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 INTS9Q9NV88 658 aaKnown RBP11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 THAP1Q9NVV9 213 aa11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 LYARQ9NX58 379 aaKnown RBP11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 C5AR2Q9P296 337 aa11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 PHF11Q9UIL8 331 aa11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 MCM8Q9UJA3 840 aa11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 HAO1Q9UJM8 370 aa11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 LHX6Q9UPM6 363 aa11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 MRPS33Q9Y291 106 aaKnown RBP11.9□□□□□ -0.5
AC004540.1-205ENST00000420774 ZFYVE26Q68DK2 2539 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 LOC102723996A0A087X1L8 192 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 IGHV1-45A0A0A0MS14 117 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 GNG14A0A1W2PPG7 69 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 TCRBV16S1A1N1A0A5B0 115 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 A8MUA0 341 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 SLC28A1O00337 649 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 PEX12O00623 359 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 LSM1O15116 133 aaKnown RBP11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 PGRMC2O15173 223 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 RGS14O43566 566 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 SEC22BO75396 215 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 NR2F6P10588 404 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 KITP10721 976 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 PRPH2P23942 346 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 BUD31P41223 144 aaPredicted RBP11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 HSD17B7P56937 341 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 RPL38P63173 70 aaKnown RBP11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 Q0VFX4 171 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 RAPSNQ13702 412 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 KIAA0040Q15053 153 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 RFTN2Q52LD8 501 aaPredicted RBP11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 DCAF10Q5QP82 559 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 NDUFAF5Q5TEU4 345 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 ATG16L1Q676U5 607 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 FAM180BQ6P0A1 224 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 BORAQ6PGQ7 559 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 PCSK4Q6UW60 755 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 RNF165Q6ZSG1 346 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 CPEB2Q7Z5Q1 589 aaKnown RBP11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 TRIM42Q8IWZ5 723 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 CDC26Q8NHZ8 85 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 ANKRD9Q96BM1 317 aaPredicted RBP11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 C19orf60Q96EN9 201 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 WDR77Q9BQA1 342 aaPredicted RBP11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 RPF2Q9H7B2 306 aaKnown RBP11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 LRTM1Q9HBL6 345 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 SLCO1B3Q9NPD5 702 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 C1orf109Q9NX04 203 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 MS4A12Q9NXJ0 267 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 HEY2Q9UBP5 337 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 DLGAP4Q9Y2H0 992 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 MMACHCQ9Y4U1 282 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 SPACA6W5XKT8 324 aa11.89□□□□□ -0.51
AC004540.1-205ENST00000420774 SPENQ96T58 3664 aaKnown RBP11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 NSG1A0A0A6YYJ2 146 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 A6NL46 340 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 CLDN4O14493 209 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 DYNC1I1O14576 645 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 KLF11O14901 512 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 ATP8B1O43520 1251 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 CTNSO60931 367 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 PEX11AO75192 247 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 IL3P08700 152 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 ANXA4P09525 319 aaPredicted RBP11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 FAM87AP0C7U9 286 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 TACR1P25103 407 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 CCL11P51671 97 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 POLE2P56282 527 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 OR4D2P58180 307 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 TAS2R50P59544 299 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 FOLH1Q04609 750 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 ZNF750Q32MQ0 723 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 HSP90B2PQ58FF3 399 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 NOXRED1Q6NXP6 359 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 GALNT18Q6P9A2 607 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 PAPD4Q6PIY7 484 aaKnown RBP11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 NDUFAF7Q7L592 441 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 PARP9Q8IXQ6 854 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 LRRC8CQ8TDW0 803 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 DOK4Q8TEW6 326 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 C16orf78Q8WTQ4 265 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 APOBEC4Q8WW27 367 aaKnown RBP11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 NACC2Q96BF6 587 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 IP6K3Q96PC2 410 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 C1orf50Q9BV19 199 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 NUF2Q9BZD4 464 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 ZNF700Q9H0M5 742 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 MED4Q9NPJ6 270 aa11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 PNO1Q9NRX1 252 aaKnown RBP11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 C19orf25Q9UFG5 118 aaPredicted RBP11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 RALYQ9UKM9 306 aaKnown RBP11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 SMG1Q96Q15 3661 aaKnown RBP11.88□□□□□ -0.51
AC004540.1-205ENST00000420774 CPAMD8Q8IZJ3 1885 aa11.87□□□□□ -0.51
AC004540.1-205ENST00000420774 A0A1W2PQ72 361 aa11.87□□□□□ -0.51
AC004540.1-205ENST00000420774 NPIPB8E9PQR5 432 aa11.87□□□□□ -0.51
AC004540.1-205ENST00000420774 HPP00738 406 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms