RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ANKHQ9HCJ1 492 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 CCDC177Q9NQR7 707 aaPredicted RBP13.79□□□□□ -0.2
HDAC9-208ENST00000417496 TMEM39AQ9NV64 488 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 MAPRE3Q9UPY8 281 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 ANGPT4Q9Y264 503 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 WDR37Q9Y2I8 494 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 DENND4CQ5VZ89 1909 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 A0A0G2JN53 185 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 ISPDA4D126 451 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 H3BN98 237 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 RFXAPO00287 272 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 PLPP1O14494 284 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 SH3BP5O60239 455 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 NR4A2P43354 598 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 MANFP55145 182 aaKnown RBP13.79□□□□□ -0.2
HDAC9-208ENST00000417496 WDR5P61964 334 aaKnown RBP13.79□□□□□ -0.2
HDAC9-208ENST00000417496 EIF4HQ15056 248 aaKnown RBP13.79□□□□□ -0.2
HDAC9-208ENST00000417496 PLAG1Q6DJT9 500 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 REEP3Q6NUK4 255 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 TCTN3Q6NUS6 607 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 PAQR6Q6TCH4 344 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 SZRD1Q7Z422 152 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 DTD2Q96FN9 168 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 TMEM19Q96HH6 336 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 SDHCQ99643 169 aaPredicted RBP13.79□□□□□ -0.2
HDAC9-208ENST00000417496 NLNQ9BYT8 704 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 TPK1Q9H3S4 243 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 CLN6Q9NWW5 311 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 EHD3Q9NZN3 535 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 TSC22D4Q9Y3Q8 395 aa13.79□□□□□ -0.2
HDAC9-208ENST00000417496 PLXND1Q9Y4D7 1925 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 CXorf51AA0A1B0GTR3 108 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 SAGE2PA6NJ88 616 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 HAT1O14929 419 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 RGS5O15539 181 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 OR10H3O60404 316 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 IFNA14P01570 189 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 RHOP08100 348 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 PTX3P26022 381 aaPredicted RBP13.78□□□□□ -0.2
HDAC9-208ENST00000417496 GPR1P46091 355 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 ZNF45Q02386 682 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 COL9A2Q14055 689 aaPredicted RBP13.78□□□□□ -0.2
HDAC9-208ENST00000417496 TMEM53Q6P2H8 277 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 SFTPA1Q8IWL2 248 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 SLC34A3Q8N130 599 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 IQCF1Q8N6M8 205 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 WDR34Q96EX3 536 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 TRMT61AQ96FX7 289 aaKnown RBP13.78□□□□□ -0.2
HDAC9-208ENST00000417496 CDCA4Q9BXL8 241 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 MARCH7Q9H992 704 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 KLK4Q9Y5K2 254 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 LINC00854A0A1B0GVQ3 168 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 TSPAN11A1L157 253 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 C5orf58C9J3I9 102 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 CCRL2O00421 344 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 PPM1DO15297 605 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 MED26O95402 600 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 KRT75O95678 551 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 STATHP02808 62 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 PSMB5P28074 263 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 RPS19P39019 145 aaKnown RBP13.78□□□□□ -0.2
HDAC9-208ENST00000417496 PRKCDQ05655 676 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 ZMAT1Q5H9K5 638 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 ZNF362Q5T0B9 420 aaPredicted RBP13.78□□□□□ -0.2
HDAC9-208ENST00000417496 TUBA3EQ6PEY2 450 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 SLC9B2Q86UD5 537 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 AKAP14Q86UN6 197 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 COMTD1Q86VU5 262 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 MEX3DQ86XN8 651 aaKnown RBP13.78□□□□□ -0.2
HDAC9-208ENST00000417496 ANKRD53Q8N9V6 530 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 EXOSC8Q96B26 276 aaKnown RBP13.78□□□□□ -0.2
HDAC9-208ENST00000417496 CRELD1Q96HD1 420 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 OPALINQ96PE5 141 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 ZDHHC5Q9C0B5 715 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 TM7SF3Q9NS93 570 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 CUEDC1Q9NWM3 386 aaPredicted RBP13.78□□□□□ -0.2
HDAC9-208ENST00000417496 REV1Q9UBZ9 1251 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 UGT2A1Q9Y4X1 527 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 AP1M2Q9Y6Q5 423 aa13.78□□□□□ -0.2
HDAC9-208ENST00000417496 OXSR1O95747 527 aaPredicted RBP13.77□□□□□ -0.21
HDAC9-208ENST00000417496 ADH1AP07327 375 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 TNNI3P19429 210 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 UQCRC2P22695 453 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 OLR1P78380 273 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 PIN1Q13526 163 aaPredicted RBP13.77□□□□□ -0.21
HDAC9-208ENST00000417496 DEFB115Q30KQ5 88 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 SPANXN2Q5MJ10 180 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 PRAMEF14Q5SWL7 426 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 PRAMEF13Q5VWM6 474 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 PLPP4Q5VZY2 271 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 ZNF367Q7RTV3 350 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 AMER3Q8N944 861 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 APOBEC4Q8WW27 367 aaKnown RBP13.77□□□□□ -0.21
HDAC9-208ENST00000417496 NXPE3Q969Y0 559 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 PDXPQ96GD0 296 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 HHIPL1Q96JK4 782 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 COQ10AQ96MF6 247 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 MAPKAP1Q9BPZ7 522 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 BARHL1Q9BZE3 327 aa13.77□□□□□ -0.21
HDAC9-208ENST00000417496 HHATLQ9HCP6 504 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms