RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 COPEO14579 308 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 GLRA3O75311 464 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 MLYCDO95822 493 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 ENO2P09104 434 aaPredicted RBP12.01□□□□□ -0.49
LINC00339-202ENST00000416769 RBP1P09455 135 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 SLC35G6P0C7Q6 338 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 HOXB4P17483 251 aaPredicted RBP12.01□□□□□ -0.49
LINC00339-202ENST00000416769 TRHRP34981 398 aaPredicted RBP12.01□□□□□ -0.49
LINC00339-202ENST00000416769 GMPRP36959 345 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 SP140Q13342 867 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 TMEM200AQ86VY9 491 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 C4orf33Q8N1A6 199 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 SPATA6LQ8N4H0 392 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 HORMAD2Q8N7B1 307 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 ABHD11Q8NFV4 315 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 OR5M9Q8NGP3 310 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 STAG3L4Q8TBR4 150 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 UTP15Q8TED0 518 aaKnown RBP12.01□□□□□ -0.49
LINC00339-202ENST00000416769 ATP6V1G3Q96LB4 118 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 PARVBQ9HBI1 364 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 ZNF358Q9NW07 568 aa12.01□□□□□ -0.49
LINC00339-202ENST00000416769 TMEM200CA6NKL6 621 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 PRMT3O60678 531 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 ITGA10O75578 1167 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 MYO1DO94832 1006 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 HIST1H2AGP0C0S8 130 aaPredicted RBP12□□□□□ -0.49
LINC00339-202ENST00000416769 CREB1P16220 341 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 HIST1H2ADP20671 130 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 HRH2P25021 359 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 MSX1P28360 303 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 DNAJA1P31689 397 aaKnown RBP12□□□□□ -0.49
LINC00339-202ENST00000416769 SCTRP47872 440 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 IST1P53990 364 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 PMPCAQ10713 525 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 HERC3Q15034 1050 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 CCDC153Q494R4 210 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 XKR6Q5GH73 641 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 SBSNQ6UWP8 590 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 ADAMTSL2Q86TH1 951 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 LIX1LQ8IVB5 337 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 DMRTC2Q8IXT2 367 aaPredicted RBP12□□□□□ -0.49
LINC00339-202ENST00000416769 CYP4Z2PQ8N1L4 340 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 CA13Q8N1Q1 262 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 ZFP62Q8NB50 900 aaPredicted RBP12□□□□□ -0.49
LINC00339-202ENST00000416769 OR4K1Q8NGD4 311 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 LILRB4Q8NHJ6 448 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 NEIL2Q969S2 332 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 APOPT1Q96IL0 206 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 HIST1H2AHQ96KK5 128 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 HIST1H2AJQ99878 128 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 MRPL57Q9BQC6 102 aaKnown RBP12□□□□□ -0.49
LINC00339-202ENST00000416769 H2AFJQ9BTM1 129 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 TRIM54Q9BYV2 358 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 DEFB126Q9BYW3 111 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 PLSCR2Q9NRY7 297 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 PNPLA3Q9NST1 481 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 COQ3Q9NZJ6 369 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 KCMF1Q9P0J7 381 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 TMEM216Q9P0N5 145 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 FBXW2Q9UKT8 454 aa12□□□□□ -0.49
LINC00339-202ENST00000416769 NCKAP5O14513 1909 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 HRNRQ86YZ3 2850 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-202ENST00000416769 TRBC2A0A5B9 178 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 HMGB1P1B2RPK0 211 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-202ENST00000416769 NPIPA2E9PIF3 369 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 NPIPA3F8WFD2 350 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 TYROBPO43914 113 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 ZNF354AO60765 605 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-202ENST00000416769 GUCA1CO95843 209 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 CELA3AP09093 270 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 KCNC1P48547 511 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 CCR8P51685 355 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 SLC18A1P54219 525 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 DLX5P56178 289 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 MAGOHP61326 146 aaKnown RBP11.99□□□□□ -0.49
LINC00339-202ENST00000416769 CDKL1Q00532 357 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 RUNX2Q13950 521 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 OR4D1Q15615 310 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 TSNQ15631 228 aaKnown RBP11.99□□□□□ -0.49
LINC00339-202ENST00000416769 C18orf21Q32NC0 220 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-202ENST00000416769 TTMPQ5BVD1 217 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 TECRLQ5HYJ1 363 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 CDKL4Q5MAI5 379 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 QSOX2Q6ZRP7 698 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 CLNKQ7Z7G1 428 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 MMP21Q8N119 569 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 ARMC10Q8N2F6 343 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 TMEM151AQ8N4L1 468 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 ZNF321PQ8N8H1 164 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 OR56A3Q8NH54 315 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 C16orf52Q8NHV5 167 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 NT5CQ8TCD5 201 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 NCLNQ969V3 563 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 TMEM125Q96AQ2 219 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 SCYL1Q96KG9 808 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 ATOH8Q96SQ7 321 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 TMUB1Q9BVT8 246 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 PCBD2Q9H0N5 130 aa11.99□□□□□ -0.49
LINC00339-202ENST00000416769 MRPL46Q9H2W6 279 aaKnown RBP11.99□□□□□ -0.49
LINC00339-202ENST00000416769 GSX1Q9H4S2 264 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms