RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 SEMA4BQ9NPR2 832 aaPredicted RBP17.87■□□□□ 0.45
UBXN4-202ENST00000415164 CD274Q9NZQ7 290 aa17.87■□□□□ 0.45
UBXN4-202ENST00000415164 SNX12Q9UMY4 172 aa17.87■□□□□ 0.45
UBXN4-202ENST00000415164 NF1P21359 2839 aa17.87■□□□□ 0.45
UBXN4-202ENST00000415164 HCFC1P51610 2035 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 MTORP42345 2549 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 TRGV5A0A0B4J1U4 118 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 AQP7O14520 342 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 TAPBPO15533 448 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 ETHE1O95571 254 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 TBX6O95947 436 aaPredicted RBP17.86■□□□□ 0.45
UBXN4-202ENST00000415164 IGHG3P01860 377 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 S100BP04271 92 aaPredicted RBP17.86■□□□□ 0.45
UBXN4-202ENST00000415164 CPN2P22792 545 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 UQCRC1P31930 480 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 ADH7P40394 386 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 MSH2P43246 934 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 KCNC1P48547 511 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 PPP2R2AP63151 447 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 KCNJ2P63252 427 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 HIST2H2ACQ16777 129 aaPredicted RBP17.86■□□□□ 0.45
UBXN4-202ENST00000415164 ADPRMQ3LIE5 342 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 HIST2H2AA3Q6FI13 130 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 ARSKQ6UWY0 536 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 GPSM1Q86YR5 675 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 TCAIMQ8N3R3 496 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 GOLM1Q8NBJ4 401 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 DOK4Q8TEW6 326 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 KIAA1191Q96A73 305 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 LRRC39Q96DD0 335 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 PTCD3Q96EY7 689 aaKnown RBP17.86■□□□□ 0.45
UBXN4-202ENST00000415164 SGCZQ96LD1 299 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 DGAT2Q96PD7 388 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 KCNC2Q96PR1 638 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 KRT12Q99456 494 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 GPATCH1Q9BRR8 931 aaKnown RBP17.86■□□□□ 0.45
UBXN4-202ENST00000415164 ZNF490Q9ULM2 529 aaPredicted RBP17.86■□□□□ 0.45
UBXN4-202ENST00000415164 L3MBTL1Q9Y468 752 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 ATG4BQ9Y4P1 393 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.86■□□□□ 0.45
UBXN4-202ENST00000415164 ZNF407Q9C0G0 2248 aa17.86■□□□□ 0.45
UBXN4-202ENST00000415164 SAP18O00422 153 aaKnown RBP17.85■□□□□ 0.45
UBXN4-202ENST00000415164 PHGDHO43175 533 aaKnown RBP17.85■□□□□ 0.45
UBXN4-202ENST00000415164 WDR1O75083 606 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 STK16O75716 305 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 LRATO95237 230 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 IVDP26440 423 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 SSR2P43308 183 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 DLX5P56178 289 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 DR1Q01658 176 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 IRF8Q02556 426 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 FOLH1Q04609 750 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 FASTKD3Q14CZ7 662 aaKnown RBP17.85■□□□□ 0.45
UBXN4-202ENST00000415164 CEBPEQ15744 281 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 PDK4Q16654 411 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 PAGE2BQ5JRK9 111 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 ZNF793Q6ZN11 406 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 LIX1Q8N485 282 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 FAM13CQ8NE31 585 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 PPWD1Q96BP3 646 aaKnown RBP17.85■□□□□ 0.45
UBXN4-202ENST00000415164 EFCAB11Q9BUY7 163 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 ROGDIQ9GZN7 287 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 PITHD1Q9GZP4 211 aaPredicted RBP17.85■□□□□ 0.45
UBXN4-202ENST00000415164 RHOJQ9H4E5 214 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 PRDM7Q9NQW5 492 aa17.85■□□□□ 0.45
UBXN4-202ENST00000415164 MTO1Q9Y2Z2 717 aaKnown RBP17.85■□□□□ 0.45
UBXN4-202ENST00000415164 A0A1B0GVC2 190 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 DYRK3O43781 588 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 PRAMEF4O60810 478 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 CCDC166P0CW27 439 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 KIR2DL3P43628 341 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 TRPC1P48995 793 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 CHIT1Q13231 466 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 AP5B1Q2VPB7 878 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 SLC25A35Q3KQZ1 300 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 PRAMEF9Q5VWM5 478 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 SLC22A10Q63ZE4 541 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 SULT1C3Q6IMI6 304 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 ACOT4Q8N9L9 421 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 CHDHQ8NE62 594 aaPredicted RBP17.84■□□□□ 0.45
UBXN4-202ENST00000415164 OR8K3Q8NH51 312 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 SLC22A8Q8TCC7 542 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 POM121Q96HA1 1249 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 GAL3ST4Q96RP7 486 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 PHACTR1Q9C0D0 580 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 DERL2Q9GZP9 239 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 LIME1Q9H400 295 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 LYRM4Q9HD34 91 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 NSMCE4AQ9NXX6 385 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 TXNDC16Q9P2K2 825 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 SPRR3Q9UBC9 169 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 SPG11Q96JI7 2443 aa17.84■□□□□ 0.45
UBXN4-202ENST00000415164 SUSD5O60279 629 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 TGFB1P01137 390 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 CD22P20273 847 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 ATP5A1P25705 553 aaKnown RBP17.83■□□□□ 0.44
UBXN4-202ENST00000415164 FOXO1Q12778 655 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 LAPTM5Q13571 262 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 DDX39BQ13838 428 aaKnown RBP17.83■□□□□ 0.44
UBXN4-202ENST00000415164 FBXW10Q5XX13 1052 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms