RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 MAGEB10Q96LZ2 347 aaPredicted RBP9.46□□□□□ -0.9
DDB1-202ENST00000414411 CCDC115Q96NT0 180 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 AIF1LQ9BQI0 150 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 ACPTQ9BZG2 426 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 DPY30Q9C005 99 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 TGIF2Q9GZN2 237 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 CLMPQ9H6B4 373 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 C1orf109Q9NX04 203 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 KLHL3Q9UH77 587 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 MYRFQ9Y2G1 1151 aa9.46□□□□□ -0.9
DDB1-202ENST00000414411 CROCCQ5TZA2 2017 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 RNF103-CHMP3A0A140T963 221 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 EI24O14681 340 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 HCRTR1O43613 425 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 SEC22BO75396 215 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 LDLRP01130 860 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 IL6P05231 212 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 PGRP06401 933 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 FTH1P19P0C7X4 201 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 MSL3P1P0C860 447 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 NELFEP18615 380 aaKnown RBP9.45□□□□□ -0.9
DDB1-202ENST00000414411 GGT1P19440 569 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 MYF6P23409 242 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 CXCR2P25025 360 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 HSD11B2P80365 405 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 MERTKQ12866 999 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 TRA2AQ13595 282 aaKnown RBP eCLIP9.45□□□□□ -0.9
DDB1-202ENST00000414411 SLBPQ14493 270 aaKnown RBP eCLIP9.45□□□□□ -0.9
DDB1-202ENST00000414411 MAPKAPK3Q16644 382 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 PAGE2BQ5JRK9 111 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 SPANXN4Q5MJ08 99 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 SNAP47Q5SQN1 464 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 B3GNT8Q7Z7M8 397 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 PLD3Q8IV08 490 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 ANKRD53Q8N9V6 530 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 OR7G3Q8NG95 312 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 ZNF583Q96ND8 569 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 OR2A5Q96R48 311 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 SEPHS2Q99611 448 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 CHID1Q9BWS9 393 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 RHBGQ9H310 441 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 ENAMQ9NRM1 1142 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 ZNF639Q9UID6 485 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 PCDHGA11Q9Y5H2 935 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 V9GYQ6 96 aa9.45□□□□□ -0.9
DDB1-202ENST00000414411 FEZF1A0PJY2 475 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 A8MU76 341 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 TBX6O95947 436 aaPredicted RBP9.44□□□□□ -0.9
DDB1-202ENST00000414411 PDYNP01213 254 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 MT-ND1P03886 318 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 GNAO1P09471 354 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 BCKDHAP12694 445 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 ZNF23P17027 643 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 CCKBRP32239 447 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 AHRP35869 848 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 BCL6P41182 706 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 GCGRP47871 477 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 SH3BGRP55822 239 aaPredicted RBP9.44□□□□□ -0.9
DDB1-202ENST00000414411 SIM1P81133 766 aaPredicted RBP9.44□□□□□ -0.9
DDB1-202ENST00000414411 PLIN5Q00G26 463 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 RSPO4Q2I0M5 234 aaPredicted RBP9.44□□□□□ -0.9
DDB1-202ENST00000414411 TUSC1Q2TAM9 212 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 SLC36A3Q495N2 470 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 ADNP2Q6IQ32 1131 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 MED27Q6P2C8 311 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 BORAQ6PGQ7 559 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 DHRS13Q6UX07 377 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 RNF44Q7L0R7 432 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 VN1R5Q7Z5H4 357 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 ADCK2Q7Z695 626 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 MSRB3Q8IXL7 192 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 RIMKLAQ8IXN7 391 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 KRT78Q8N1N4 520 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 KRTCAP2Q8N6L1 136 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 RCBTB1Q8NDN9 531 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 TM4SF19Q96DZ7 209 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 CCDC74BQ96LY2 380 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 FCRL4Q96PJ5 515 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 SYNDIG1Q9H7V2 258 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 CLK4Q9HAZ1 481 aaKnown RBP9.44□□□□□ -0.9
DDB1-202ENST00000414411 VCX3AQ9NNX9 186 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 PDE7BQ9NP56 450 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 SMPD3Q9NY59 655 aaPredicted RBP9.44□□□□□ -0.9
DDB1-202ENST00000414411 SLC25A37Q9NYZ2 338 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 PTTG2Q9NZH5 202 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 CDV3Q9UKY7 258 aaKnown RBP9.44□□□□□ -0.9
DDB1-202ENST00000414411 LOC105369274A0A096LPK9 316 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 TRBV5-3A0A0A0MS03 114 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 LOC102723532A0A0G2JNH3 316 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 KCNK5O95279 499 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 RAP2AP10114 183 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 PRPH2P23942 346 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 GRK3P35626 688 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 SEPHS1P49903 392 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 NOVA1P51513 510 aaKnown RBP9.44□□□□□ -0.9
DDB1-202ENST00000414411 RPS15AP62244 130 aaKnown RBP9.44□□□□□ -0.9
DDB1-202ENST00000414411 TUBA4AP68366 448 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 CYP4F3Q08477 520 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 VAC14Q08AM6 782 aa9.44□□□□□ -0.9
DDB1-202ENST00000414411 LSAMPQ13449 338 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms