RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 KPNA2P52292 529 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SNU13P55769 128 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 ATP5IP56385 69 aaPredicted RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 EEF1A1P68104 462 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 EEF1A2Q05639 463 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SNTB2Q13425 540 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SELPLGQ14242 412 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 ZNF273Q14593 569 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SGCBQ16585 318 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 FAM83EQ2M2I3 478 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 ARSJQ5FYB0 599 aaPredicted RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 MS4A13Q5J8X5 152 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 EEF1A1P5Q5VTE0 462 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 RAET1GQ6H3X3 334 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 NADSYN1Q6IA69 706 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 MSANTD2Q6P1R3 559 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 TMC5Q6UXY8 1006 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 RBPMS2Q6ZRY4 209 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 TPGS1Q6ZTW0 290 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 ADCK2Q7Z695 626 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 TDHQ8IZJ6 230 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 BPIFCQ8NFQ6 507 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 OR8J1Q8NGP2 316 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 OSCP1Q8WVF1 389 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 RASSF5Q8WWW0 418 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 NTAN1Q96AB6 310 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 FKBP10Q96AY3 582 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 RHBDF1Q96CC6 855 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 P2RY11Q96G91 374 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 C5orf30Q96GV9 206 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 RBM4BQ9BQ04 359 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 CINPQ9BW66 212 aaPredicted RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 RBM4Q9BWF3 364 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 FUNDC2Q9BWH2 189 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 RTN4RQ9BZR6 473 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 OR2B2Q9GZK3 357 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 TP63Q9H3D4 680 aaPredicted RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 IPPKQ9H8X2 491 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 MEAF6Q9HAF1 191 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SCUBE2Q9NQ36 999 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 DTLQ9NZJ0 730 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 CCDC167Q9P0B6 97 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 NCDNQ9UBB6 729 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 DNMT3BQ9UBC3 853 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 ABCD2Q9UBJ2 740 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 ZNF639Q9UID6 485 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 PADI1Q9ULC6 663 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 RUVBL2Q9Y230 463 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 CCL26Q9Y258 94 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 NDUFAF1Q9Y375 327 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 TESMINQ9Y4I5 508 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 NUP205Q92621 2012 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 USP34Q70CQ2 3546 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 BRWD1Q9NSI6 2320 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 LOC105371267A0A1B0GV96 52 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 TTC24A2A3L6 582 aaPredicted RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 M0R3G1 203 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 LINC01565O15544 149 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 CLIC3O95833 236 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 LDLRP01130 860 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 YES1P07947 543 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 CHRNB1P11230 501 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 TNFRSF1AP19438 455 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SLC6A4P31645 630 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 DNAJB13P59910 316 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SH3BP2P78314 561 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 KRR1Q13601 381 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 DNASE1L3Q13609 305 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 LDLRAP1Q5SW96 308 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 GRASPQ7Z6J2 395 aaPredicted RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SLC22A16Q86VW1 577 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SPPL2CQ8IUH8 684 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 ADGRG5Q8IZF4 528 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 MINDY1Q8N5J2 469 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 PAPD5Q8NDF8 572 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 MAGEE2Q8TD90 523 aaPredicted RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 EDAQ92838 391 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 IGSF8Q969P0 613 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SAT2Q96F10 170 aaPredicted RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 MED30Q96HR3 178 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 AIFM2Q9BRQ8 373 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 BDH2Q9BUT1 245 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 PRDM12Q9H4Q4 367 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 BFARQ9NZS9 450 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 CRNNQ9UBG3 495 aaPredicted RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 DNMT3LQ9UJW3 386 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 RNF112Q9ULX5 631 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 PPIL1Q9Y3C6 166 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 FAM149AA5PLN7 773 aa8.96□□□□□ -0.97
SNHG3-201ENST00000413987 SAGE2PA6NJ88 616 aa8.96□□□□□ -0.97
SNHG3-201ENST00000413987 E9PAM4 449 aa8.96□□□□□ -0.97
SNHG3-201ENST00000413987 TK2O00142 265 aa8.96□□□□□ -0.97
SNHG3-201ENST00000413987 SNPHO15079 494 aa8.96□□□□□ -0.97
SNHG3-201ENST00000413987 ECI2O75521 394 aa8.96□□□□□ -0.97
SNHG3-201ENST00000413987 CH25HO95992 272 aa8.96□□□□□ -0.97
SNHG3-201ENST00000413987 JUNP05412 331 aaKnown RBP8.96□□□□□ -0.97
SNHG3-201ENST00000413987 GFAPP14136 432 aa8.96□□□□□ -0.97
SNHG3-201ENST00000413987 ITIH1P19827 911 aa8.96□□□□□ -0.97
SNHG3-201ENST00000413987 FSHRP23945 695 aa8.96□□□□□ -0.97
SNHG3-201ENST00000413987 CD40LGP29965 261 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms