RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 ZNF331Q9NQX6 463 aaPredicted RBP0.77□□□□□ -2.29
RNU2-55P-201ENST00000411146 TBC1D22BQ9NU19 505 aa0.77□□□□□ -2.29
RNU2-55P-201ENST00000411146 EXOC1Q9NV70 894 aa0.77□□□□□ -2.29
RNU2-55P-201ENST00000411146 CPSF2Q9P2I0 782 aaKnown RBP0.77□□□□□ -2.29
RNU2-55P-201ENST00000411146 MLXQ9UH92 298 aa0.77□□□□□ -2.29
RNU2-55P-201ENST00000411146 RPS6KA6Q9UK32 745 aa0.77□□□□□ -2.29
RNU2-55P-201ENST00000411146 PRG3Q9Y2Y8 225 aaPredicted RBP0.77□□□□□ -2.29
RNU2-55P-201ENST00000411146 TNRQ92752 1358 aa0.77□□□□□ -2.29
RNU2-55P-201ENST00000411146 MTCL1Q9Y4B5 1905 aaKnown RBP0.77□□□□□ -2.29
RNU2-55P-201ENST00000411146 TCRBV21S2A2A0A5A6 115 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 BCLAF3A2AJT9 711 aaKnown RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 MFSD2BA6NFX1 497 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 EFCAB7A8K855 629 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 A8MX80 341 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 TMEM150CB9EJG8 249 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 DUSP11O75319 330 aaKnown RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 CSO75390 466 aaKnown RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 EIF3JO75822 258 aaKnown RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 TSPAN9O75954 239 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 WISP3O95389 354 aaPredicted RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 FGF19O95750 216 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 DNTTP04053 509 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 SP9P0CG40 484 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 ACAT1P24752 427 aaKnown RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 CCNE1P24864 410 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 PMELP40967 661 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 OR3A1P47881 315 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 CDX1P47902 265 aaPredicted RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 MFAP3P55082 362 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 PTENP60484 403 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 RPL27P61353 136 aaKnown RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 ASAH1Q13510 395 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 CUL4AQ13619 759 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 KCTD2Q14681 263 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 ANKRD55Q3KP44 614 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 SBK1Q52WX2 424 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 PLPP4Q5VZY2 271 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 KRT39Q6A163 491 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 KLHL10Q6JEL2 608 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 RBPMS2Q6ZRY4 209 aaKnown RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 RFPL4BQ6ZWI9 263 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 ABI3BPQ7Z7G0 1075 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 ERI1Q8IV48 349 aaKnown RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 PI4KAP1Q8N8J0 262 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 Q8N9G6 341 aaPredicted RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 EXT2Q93063 718 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 EVI5LQ96CN4 794 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 ERGIC2Q96RQ1 377 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 CXXC4Q9H2H0 198 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 MTIF3Q9H2K0 278 aaKnown RBP0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 FN3KQ9H479 309 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 ZNF702PQ9H963 129 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 NMUR1Q9HB89 426 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 TAS2R16Q9NYV7 291 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 KLHL21Q9UJP4 597 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 GPR34Q9UPC5 381 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 FAM169AQ9Y6X4 670 aa0.76□□□□□ -2.29
RNU2-55P-201ENST00000411146 ITGB4P16144 1822 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 LRCOL1A6NCL2 159 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 MAGEB4O15481 346 aaPredicted RBP0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 CA11O75493 328 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 GFPT2O94808 682 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 LYNP07948 512 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 TOP1P11387 765 aaKnown RBP0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 P4HA1P13674 534 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 ALOX12P18054 663 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 EPORP19235 508 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 MTIF2P46199 727 aaKnown RBP0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 PPP5CP53041 499 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 CSE1LP55060 971 aaKnown RBP0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 DIO3P55073 304 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 SLC10A1Q14973 349 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 SHHQ15465 462 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 RFTN2Q52LD8 501 aaPredicted RBP0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 HSP90AB4PQ58FF6 505 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 FAM46CQ5VWP2 391 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 LIPJQ5W064 366 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 ITPRIPL1Q6GPH6 555 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 ENPP7Q6UWV6 458 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 SCARA5Q6ZMJ2 495 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 ZNF730Q6ZMV8 503 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 GPR141Q7Z602 305 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 APOBEC3FQ8IUX4 373 aaKnown RBP0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 WDR49Q8IV35 697 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 EXOC8Q8IYI6 725 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 TTC30BQ8N4P2 665 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 SMYD1Q8NB12 490 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 RELL2Q8NC24 303 aaPredicted RBP0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 OR13C5Q8NGS8 318 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 OR4F5Q8NH21 305 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 VN1R17PQ8TDU5 208 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 EXOC4Q96A65 974 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 PNPLA2Q96AD5 504 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 FAM122AQ96E09 287 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 ZNF274Q96GC6 653 aaPredicted RBP0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 SERINC2Q96SA4 455 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 PRMT1Q99873 361 aaKnown RBP0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 WFDC1Q9HC57 220 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 AMBNQ9NP70 447 aa0.75□□□□□ -2.29
RNU2-55P-201ENST00000411146 ZNF221Q9UK13 617 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms