RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 PRPS1L1P21108 318 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 RPL3P39023 403 aaKnown RBP14.32□□□□□ -0.12
LSM5-207ENST00000410044 RPS15P62841 145 aaKnown RBP14.32□□□□□ -0.12
LSM5-207ENST00000410044 IGLV3-21P80748 117 aaPredicted RBP14.32□□□□□ -0.12
LSM5-207ENST00000410044 MC1RQ01726 317 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 RHAGQ02094 409 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 DNASE1L3Q13609 305 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 PDE7AQ13946 482 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 ERV3-1Q14264 604 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 SLC48A1Q6P1K1 146 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 QSOX2Q6ZRP7 698 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 LAPTM4BQ86VI4 370 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 SCUBE1Q8IWY4 988 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 CPSF7Q8N684 471 aaKnown RBP14.32□□□□□ -0.12
LSM5-207ENST00000410044 TMEM52Q8NDY8 209 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 OR2Y1Q8NGV0 311 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 UCN3Q969E3 161 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 NACC2Q96BF6 587 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 TSSK3Q96PN8 268 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 REEP4Q9H6H4 257 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 MRGBPQ9NV56 204 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 ZIM2Q9NZV7 527 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 KCND3Q9UK17 655 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 CROTQ9UKG9 612 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 PSME2Q9UL46 239 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 PADI2Q9Y2J8 665 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 SSUH2Q9Y2M2 353 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 CLDN16Q9Y5I7 305 aa14.32□□□□□ -0.12
LSM5-207ENST00000410044 IGKV3D-11A0A0A0MRZ8 115 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 MED19A0JLT2 244 aaPredicted RBP14.31□□□□□ -0.12
LSM5-207ENST00000410044 SYNDIG1LA6NDD5 238 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 GABRR3A8MPY1 467 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 PCDH17O14917 1159 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 JRKO75564 520 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 FURINP09958 794 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 GPX3P22352 226 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 PTPN4P29074 926 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 PPP2R1BP30154 601 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 ADSLP30566 484 aaPredicted RBP14.31□□□□□ -0.12
LSM5-207ENST00000410044 DLSTP36957 453 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 HNRNPFP52597 415 aaKnown RBP14.31□□□□□ -0.12
LSM5-207ENST00000410044 PCBP4P57723 403 aaKnown RBP14.31□□□□□ -0.12
LSM5-207ENST00000410044 PTGR1Q14914 329 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 CEBPEQ15744 281 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 OR52E8Q6IFG1 317 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 R3HCC1LQ7Z5L2 792 aaKnown RBP14.31□□□□□ -0.12
LSM5-207ENST00000410044 CAMKMTQ7Z624 323 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 IL22RA1Q8N6P7 574 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 ENDOVQ8N8Q3 282 aaKnown RBP14.31□□□□□ -0.12
LSM5-207ENST00000410044 ANKS4BQ8N8V4 417 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 FAM47BQ8NA70 645 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 STARD8Q92502 1023 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 ANKRD9Q96BM1 317 aaPredicted RBP14.31□□□□□ -0.12
LSM5-207ENST00000410044 COQ8BQ96D53 544 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 EFHD1Q9BUP0 239 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 DPH1Q9BZG8 443 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 VN1R1Q9GZP7 353 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 FAM107BQ9H098 131 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 PRTFDC1Q9NRG1 225 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 TCFL5Q9UL49 500 aa14.31□□□□□ -0.12
LSM5-207ENST00000410044 TLX3O43711 291 aaPredicted RBP14.3□□□□□ -0.12
LSM5-207ENST00000410044 B4GALT2O60909 372 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 GPR75O95800 540 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 IGHEP01854 428 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 F8A1P23610 371 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 EFNA3P52797 238 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 EMP2P54851 167 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 BTG2P78543 158 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 CLN3Q13286 438 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 SSPNQ14714 243 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 RPS6KA2Q15349 733 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 TGIF1Q15583 401 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 TMEM205Q6UW68 189 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 RIPOR1Q6ZS17 1223 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 NATD1Q8N6N6 113 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 GLB1L3Q8NCI6 653 aaPredicted RBP14.3□□□□□ -0.12
LSM5-207ENST00000410044 ZNF248Q8NDW4 579 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 TESCQ96BS2 214 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 CATSPER2Q96P56 530 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 DPY30Q9C005 99 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 CCDC86Q9H6F5 360 aaKnown RBP14.3□□□□□ -0.12
LSM5-207ENST00000410044 SEMA3GQ9NS98 782 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 MKL2Q9ULH7 1088 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 ARL2BPQ9Y2Y0 163 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 PTRH2Q9Y3E5 179 aaKnown RBP14.3□□□□□ -0.12
LSM5-207ENST00000410044 CACNA1AO00555 2505 aa14.3□□□□□ -0.12
LSM5-207ENST00000410044 WASHC1A8K0Z3 465 aa14.29□□□□□ -0.12
LSM5-207ENST00000410044 IDSB3KWA1 339 aa14.29□□□□□ -0.12
LSM5-207ENST00000410044 SCAMP2O15127 329 aaKnown RBP14.29□□□□□ -0.12
LSM5-207ENST00000410044 PRKRAO75569 313 aaKnown RBP14.29□□□□□ -0.12
LSM5-207ENST00000410044 UMODP07911 640 aa14.29□□□□□ -0.12
LSM5-207ENST00000410044 DDX5P17844 614 aaKnown RBP14.29□□□□□ -0.12
LSM5-207ENST00000410044 NCF2P19878 526 aaPredicted RBP14.29□□□□□ -0.12
LSM5-207ENST00000410044 FRKP42685 505 aaPredicted RBP14.29□□□□□ -0.12
LSM5-207ENST00000410044 ZFP36L2P47974 494 aaKnown RBP14.29□□□□□ -0.12
LSM5-207ENST00000410044 CLNS1AP54105 237 aaKnown RBP14.29□□□□□ -0.12
LSM5-207ENST00000410044 UFM1P61960 85 aa14.29□□□□□ -0.12
LSM5-207ENST00000410044 SRSF11Q05519 484 aaKnown RBP14.29□□□□□ -0.12
LSM5-207ENST00000410044 ACTN3Q08043 901 aaPredicted RBP14.29□□□□□ -0.12
LSM5-207ENST00000410044 SF3A3Q12874 501 aaKnown RBP eCLIP14.29□□□□□ -0.121e-7■■■■□ 19.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms