RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 REPS1Q96D71 796 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 MTFMTQ96DP5 389 aaKnown RBP16.49■□□□□ 0.23
LSM5-204ENST00000409909 NTMT1Q9BV86 223 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 MRPL46Q9H2W6 279 aaKnown RBP16.49■□□□□ 0.23
LSM5-204ENST00000409909 LIN28AQ9H9Z2 209 aaKnown RBP16.49■□□□□ 0.23
LSM5-204ENST00000409909 ATG4BQ9Y4P1 393 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 CLCA3PQ9Y6N3 262 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 A0A1B0GTL3 188 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 FOXE1O00358 373 aaPredicted RBP16.48■□□□□ 0.23
LSM5-204ENST00000409909 PPP6CO00743 305 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 FCHO1O14526 889 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 FGF17O60258 216 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 SMIM24O75264 130 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 UNC5CO95185 931 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 CLDN1O95832 211 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 BSGP35613 385 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 ARFIP1P53367 373 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 HNRNPH2P55795 449 aaKnown RBP16.48■□□□□ 0.23
LSM5-204ENST00000409909 TRAF3Q13114 568 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 CUL3Q13618 768 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 MAPKAPK3Q16644 382 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 C18orf63Q68DL7 685 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.48■□□□□ 0.23
LSM5-204ENST00000409909 GPR180Q86V85 440 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 ZCCHC7Q8N3Z6 543 aaKnown RBP16.48■□□□□ 0.23
LSM5-204ENST00000409909 TMEM178AQ8NBL3 297 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 MORN4Q8NDC4 146 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 SREK1Q8WXA9 508 aaKnown RBP16.48■□□□□ 0.23
LSM5-204ENST00000409909 ATP6V1E2Q96A05 226 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 FRMD6Q96NE9 622 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 PSD3Q9NYI0 1048 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 SEC14L3Q9UDX4 400 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 SPACA6W5XKT8 324 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 MYO7BQ6PIF6 2116 aa16.48■□□□□ 0.23
LSM5-204ENST00000409909 TEX15Q9BXT5 2789 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 A0A0A6YYD5 115 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 SYNDIG1LA6NDD5 238 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 WASHC1A8K0Z3 465 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 C17orf105B2RV13 164 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 PROM1O43490 865 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 TMPRSS11DO60235 418 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 NME2P1O60361 137 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 PRKRAO75569 313 aaKnown RBP16.47■□□□□ 0.23
LSM5-204ENST00000409909 ITGA10O75578 1167 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 ZFAND5O76080 213 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 RPS17P08708 135 aaKnown RBP16.47■□□□□ 0.23
LSM5-204ENST00000409909 NME2P22392 152 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 CCNG1P51959 295 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 PHEXP78562 749 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 IGLV3-21P80748 117 aaPredicted RBP16.47■□□□□ 0.23
LSM5-204ENST00000409909 SERTAD2Q14140 314 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 SLC29A2Q14542 456 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 LGSNQ5TDP6 509 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 C1QL3Q5VWW1 255 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 FAM219BQ5XKK7 198 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 MRM1Q6IN84 353 aaKnown RBP16.47■□□□□ 0.23
LSM5-204ENST00000409909 DGAT2L6Q6ZPD8 337 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 GSPT2Q8IYD1 628 aaKnown RBP16.47■□□□□ 0.23
LSM5-204ENST00000409909 OR14A16Q8NHC5 309 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 DAZLQ92904 295 aaKnown RBP16.47■□□□□ 0.23
LSM5-204ENST00000409909 CENPKQ9BS16 269 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 TSPAN10Q9H1Z9 355 aaPredicted RBP16.47■□□□□ 0.23
LSM5-204ENST00000409909 RPF2Q9H7B2 306 aaKnown RBP16.47■□□□□ 0.23
LSM5-204ENST00000409909 DDX31Q9H8H2 851 aaKnown RBP16.47■□□□□ 0.23
LSM5-204ENST00000409909 SEMA4BQ9NPR2 832 aaPredicted RBP16.47■□□□□ 0.23
LSM5-204ENST00000409909 MS4A12Q9NXJ0 267 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 ASB4Q9Y574 426 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 ITPR2Q14571 2701 aa16.47■□□□□ 0.23
LSM5-204ENST00000409909 CROCCQ5TZA2 2017 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 A8MT66 165 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 TNNI3P19429 210 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 ARL1P40616 181 aaPredicted RBP16.46■□□□□ 0.23
LSM5-204ENST00000409909 TNFRSF17Q02223 184 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 RNFT1Q5M7Z0 435 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 FRG2Q64ET8 278 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 HSDL2Q6YN16 418 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 MDGA2Q7Z553 956 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 FJX1Q86VR8 437 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 SIAH3Q8IW03 269 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 OR4F6Q8NGB9 312 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 SLC2A12Q8TD20 617 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 ZNF483Q8TF39 744 aaPredicted RBP16.46■□□□□ 0.23
LSM5-204ENST00000409909 TANKQ92844 425 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 UCN3Q969E3 161 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 RELTQ969Z4 430 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 PPWD1Q96BP3 646 aaKnown RBP16.46■□□□□ 0.23
LSM5-204ENST00000409909 MTBPQ96DY7 904 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 FRG2BQ96QU4 278 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 CCDC77Q9BR77 488 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 OR8D2Q9GZM6 311 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 TMEM216Q9P0N5 145 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 MYOTQ9UBF9 498 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 PHF11Q9UIL8 331 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 PPT2Q9UMR5 302 aa16.46■□□□□ 0.23
LSM5-204ENST00000409909 YARS2Q9Y2Z4 477 aaKnown RBP16.46■□□□□ 0.23
LSM5-204ENST00000409909 A0A1W2PR48 441 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 OR2J2O76002 312 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 GBAP04062 536 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 TSPAN8P19075 237 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 STT3AP46977 705 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms