RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 PPP2R1BP30154 601 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 BUD31P41223 144 aaPredicted RBP13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 SLC13A2Q13183 592 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 MRPL14Q6P1L8 145 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 IGF2-ASQ6U949 168 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 LANCL3Q6ZV70 420 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 DTX1Q86Y01 620 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 TICAM1Q8IUC6 712 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 HOMEZQ8IX15 550 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 ZNF578Q96N58 590 aaPredicted RBP13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 SPSB2Q99619 263 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 VN1R1Q9GZP7 353 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 NMUR2Q9GZQ4 415 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 NECTIN3Q9NQS3 549 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 PRTFDC1Q9NRG1 225 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 ARMCX1Q9P291 453 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 ANGPTL2Q9UKU9 493 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 PCDHA9Q9Y5H5 950 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 SPACA6W5XKT8 324 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 ANKRD28O15084 1053 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 LIPCP11150 499 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 PIM1P11309 404 aaPredicted RBP13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 PRPS2P11908 318 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 FOLH1Q04609 750 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 DUSP2Q05923 314 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 DNASE1L3Q13609 305 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 UGT8Q16880 541 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 PGS1Q32NB8 556 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 NIPAL1Q6NVV3 410 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 CIDECQ96AQ7 238 aaPredicted RBP13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 KLHL29Q96CT2 875 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 METTL2AQ96IZ6 378 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 PTCHD1Q96NR3 888 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 DPH2Q9BQC3 489 aaPredicted RBP13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 DPY30Q9C005 99 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 MIEF1Q9NQG6 463 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 SH3BP4Q9P0V3 963 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 C3orf18Q9UK00 162 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 FRYQ5TBA9 3013 aa13.26□□□□□ -0.29
CHRNA1-204ENST00000409323 IGLV3-12A0A075B6K2 115 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 IGHV3-20A0A0C4DH32 117 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 VSTM2BA6NLU5 285 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 GABRR3A8MPY1 467 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 A8MUA0 341 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 C1QTNF9BB2RNN3 333 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 IDSB3KWA1 339 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 EBAG9O00559 213 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 PRMT3O60678 531 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 KLF7O75840 302 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 RECKO95980 971 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 HEXBP07686 556 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 FURINP09958 794 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 C1QTNF9P0C862 333 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 COX7A2P14406 83 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 IDO1P14902 403 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 LIFP15018 202 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 CD82P27701 267 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 TLX1P31314 330 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 FEN1P39748 380 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 DGKQP52824 942 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 TRA2BP62995 288 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 PLIN5Q00G26 463 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 CLN3Q13286 438 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 SMU1Q2TAY7 513 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 ZNF771Q7L3S4 317 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 YTHDF3Q7Z739 585 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 MTDHQ86UE4 582 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 CCDC197Q8NCU1 140 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 DNAJB14Q8TBM8 379 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 GATA6Q92908 595 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 FKBP10Q96AY3 582 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 ANKRD9Q96BM1 317 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 PPWD1Q96BP3 646 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 C8orf44Q96CB5 159 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 CRB3Q9BUF7 120 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 FAIM2Q9BWQ8 316 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 B3GNT4Q9C0J1 378 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 GPN2Q9H9Y4 310 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 WDR41Q9HAD4 459 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 MS4A12Q9NXJ0 267 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 ASIC5Q9NY37 505 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 CCDC167Q9P0B6 97 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 UTS2RQ9UKP6 389 aa13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 FARSAQ9Y285 508 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 NUP214P35658 2090 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-204ENST00000409323 C1orf226A1L170 272 aa13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 MASP2O00187 686 aa13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 SCAMP2O15127 329 aaKnown RBP13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 GUCY1B2O75343 617 aa13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 ONECUT2O95948 504 aa13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 UMODP07911 640 aa13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 LAMP1P11279 417 aa13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 WT1P19544 449 aaPredicted RBP13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 DDCP20711 480 aa13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 GPX3P22352 226 aa13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 ASMTP46597 345 aa13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 CLDN8P56748 225 aa13.24□□□□□ -0.29
CHRNA1-204ENST00000409323 PCBP4P57723 403 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms