RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 BTN3A3O00478 584 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 PCDH17O14917 1159 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 HMGA1P17096 107 aaKnown RBP13.1□□□□□ -0.31
GSE1-203ENST00000405402 CBLP22681 906 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 SLAMF1Q13291 335 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 ERN2Q76MJ5 926 aaKnown RBP13.1□□□□□ -0.31
GSE1-203ENST00000405402 PMEPA1Q969W9 287 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 GAL3ST4Q96RP7 486 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 DPH7Q9BTV6 452 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 HDHD5Q9BXW7 423 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 OR51I1Q9H343 314 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 TRIP12Q14669 1992 aaPredicted RBP13.1□□□□□ -0.31
GSE1-203ENST00000405402 PRMT3O60678 531 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 ACPPP15309 386 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 GPM6BQ13491 265 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 SUZ12Q15022 739 aaKnown RBP13.1□□□□□ -0.31
GSE1-203ENST00000405402 SPHARQ15513 63 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 ODF4Q2M2E3 257 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 FRRS1Q6ZNA5 592 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 SPRED1Q7Z699 444 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 B3GNT8Q7Z7M8 397 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 GPR149Q86SP6 731 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 RASGEF1AQ8N9B8 481 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 ZNF563Q8TA94 476 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 DOCK3Q8IZD9 2030 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 FAM186AA6NE01 2351 aa13.1□□□□□ -0.31
GSE1-203ENST00000405402 EDDM13A0A1B0GTR0 161 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 RIIAD1A6NNX1 92 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 ASGR2P07307 311 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 LHCGRP22888 699 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 SOX3P41225 446 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 CPZQ66K79 652 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 SLC39A11Q8N1S5 342 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 PIK3R3Q92569 461 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 RFKQ969G6 155 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 FAIMQ9NVQ4 179 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 ABCD2Q9UBJ2 740 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 CACNG3O60359 315 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 SLC2A2P11168 524 aaPredicted RBP13.09□□□□□ -0.31
GSE1-203ENST00000405402 POLR2CP19387 275 aaPredicted RBP13.09□□□□□ -0.31
GSE1-203ENST00000405402 SELENOWP63302 87 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 MAD2L1BPQ15013 274 aaPredicted RBP13.09□□□□□ -0.31
GSE1-203ENST00000405402 KLHL22Q53GT1 634 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 LCN1P1Q5VSP4 162 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 C9orf43Q8TAL5 461 aaPredicted RBP13.09□□□□□ -0.31
GSE1-203ENST00000405402 TMEM80Q96HE8 168 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 SH3YL1Q96HL8 342 aaPredicted RBP13.09□□□□□ -0.31
GSE1-203ENST00000405402 PCBD2Q9H0N5 130 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 SLITRK2Q9H156 845 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 EHD1Q9H4M9 534 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 ATG2BQ96BY7 2078 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 FAM92AA1XBS5 289 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 OR6C70A6NIJ9 312 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 J3QLW9 94 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 ZNF19P17023 458 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 DAPP51397 102 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 SMSP52788 366 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 TUBA1BP68363 451 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 RELAQ04206 551 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 SLC30A6Q6NXT4 461 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 DCDC5Q6ZRR9 648 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 FAM92BQ6ZTR7 304 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 TUBA1AQ71U36 451 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 GALNT7Q86SF2 657 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 ZNF689Q96CS4 500 aaPredicted RBP13.09□□□□□ -0.31
GSE1-203ENST00000405402 TMCO6Q96DC7 493 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 MCHR1Q99705 422 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 SLC6A16Q9GZN6 736 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 MMP27Q9H306 513 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 NEUROD4Q9HD90 331 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 ING3Q9NXR8 418 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.09□□□□□ -0.31
GSE1-203ENST00000405402 CARNS1A5YM72 827 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 C1SP09871 688 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 UGT8Q16880 541 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 HMGCLL1Q8TB92 370 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 WFIKKN2Q8TEU8 576 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 HMGB4Q8WW32 186 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 CRELD1Q96HD1 420 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 TRIB3Q96RU7 358 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 MAGIXQ9H6Y5 334 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 TNFRSF10DQ9UBN6 386 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 WDR45Q9Y484 360 aa13.09□□□□□ -0.31
GSE1-203ENST00000405402 KHDRBS3O75525 346 aaKnown RBP13.08□□□□□ -0.32
GSE1-203ENST00000405402 CAPNS1P04632 268 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 RLN1P04808 185 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 UQCRC2P22695 453 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 E2F2Q14209 437 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 NDUFAF6Q330K2 333 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 GTF2IRD2BQ6EKJ0 949 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 BORAQ6PGQ7 559 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 LIPIQ6XZB0 460 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 SLC39A5Q6ZMH5 540 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 GTF2IRD2Q86UP8 949 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 POMGNT2Q8NAT1 580 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 FBXO15Q8NCQ5 510 aaPredicted RBP13.08□□□□□ -0.32
GSE1-203ENST00000405402 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.08□□□□□ -0.324e-55■■■■□ 21.2
GSE1-203ENST00000405402 KXD1Q9BQD3 176 aa13.08□□□□□ -0.32
GSE1-203ENST00000405402 NMNAT1Q9HAN9 279 aaPredicted RBP13.08□□□□□ -0.32
GSE1-203ENST00000405402 ZNF225Q9UK10 706 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms