RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 SLC3A1Q07837 685 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 ELAVL2Q12926 359 aaKnown RBP7.09□□□□□ -1.28
HDAC9-202ENST00000405010 DSG2Q14126 1118 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 ZMYND11Q15326 602 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 ZMAT1Q5H9K5 638 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 KIAA0319Q5VV43 1072 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 RGMBQ6NW40 437 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 SHFQ7M4L6 423 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 PDZD3Q86UT5 571 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 IQCHQ86VS3 1027 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 CEP76Q8TAP6 659 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 SMIM14Q96QK8 99 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 OR2A14Q96R47 310 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 TM9SF2Q99805 663 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 IFT27Q9BW83 186 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 BOCQ9BWV1 1114 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.09□□□□□ -1.28
HDAC9-202ENST00000405010 NT5DC2Q9H857 520 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 BRD7Q9NPI1 651 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 ZDHHC3Q9NYG2 299 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 CD84Q9UIB8 345 aa7.09□□□□□ -1.28
HDAC9-202ENST00000405010 TNRC6CQ9HCJ0 1690 aaKnown RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 QSOX1O00391 747 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 FAAHO00519 579 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PLSCR1O15162 318 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 MTX2O75431 263 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PRSS23O95084 383 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 SCG5P05408 212 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 CLEC2LP0C7M8 214 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PCGF2P35227 344 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ZNF140P52738 457 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 HK3P52790 923 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PSMA6P60900 246 aaKnown RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 MLLT11Q13015 90 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 NFATC2Q13469 925 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 DUSP7Q16829 419 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 TOR2AQ5JU69 321 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 GET4Q7L5D6 327 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 DNAJB7Q7Z6W7 309 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 CCDC190Q86UF4 302 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 THOC6Q86W42 341 aaKnown RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 SPAG16Q8N0X2 631 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 SYNPOQ8N3V7 929 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ING5Q8WYH8 240 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 FUBP3Q96I24 572 aaKnown RBP eCLIP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ST6GAL2Q96JF0 529 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 C17orf62Q9BQA9 187 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ZCCHC2Q9C0B9 1178 aaKnown RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 EQTNQ9NQ60 294 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 A0A1B0GVI7 797 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 MEIS3P2A8K0S8 358 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 M0R082 166 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PRKYO43930 277 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 KCNK5O95279 499 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 KLK1P06870 262 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 CBSLP0DN79 551 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 CHMP24386 653 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 CBSP35520 551 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 TAS2R50P59544 299 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ST8SIA6P61647 398 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 RPS13P62277 151 aaKnown RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ZNF763Q0D2J5 394 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 FCN2Q15485 313 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 SLC35F1Q5T1Q4 408 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 NXPE1Q8N323 547 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 C2orf73Q8N5S3 287 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 KIAA1958Q8N8K9 716 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 C1orf216Q8TAB5 229 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 MRPS31Q92665 395 aaKnown RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 TESCQ96BS2 214 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 SGTBQ96EQ0 304 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PAAF1Q9BRP4 392 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 OR51B5Q9H339 312 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 REEP4Q9H6H4 257 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PCDHB16Q9NRJ7 776 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PLCXD1Q9NUJ7 323 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ASB1Q9Y576 335 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PCDHB7Q9Y5E2 793 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ACTL7AQ9Y615 435 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 OR14I1A6ND48 311 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 LRRN3E7EW58 273 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 SLC43A1O75387 559 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 RP2O75695 350 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 HLA-DMAP28067 261 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 MTNR1AP48039 350 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 SUOXP51687 545 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PNLIPRP1P54315 467 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 PCDH1Q08174 1060 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 DBPQ10586 325 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 GPR50Q13585 617 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 SLBPQ14493 270 aaKnown RBP eCLIP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 SLC27A4Q6P1M0 643 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 CYHR1Q6ZMK1 362 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 C10orf53Q8N6V4 93 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 CLDN22Q8N7P3 220 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ZNF557Q8N988 423 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 OR52P1PQ8NH57 321 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 ELMOD3Q96FG2 381 aa7.08□□□□□ -1.28
HDAC9-202ENST00000405010 SECISBP2Q96T21 854 aaKnown RBP7.08□□□□□ -1.28
HDAC9-202ENST00000405010 NIPSNAP1Q9BPW8 284 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms