RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 SIX5Q8N196 739 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 AMER2Q8N7J2 671 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 PLA2G15Q8NCC3 412 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 XKR8Q9H6D3 395 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 SNTG1Q9NSN8 517 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 EHD3Q9NZN3 535 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 KLHL42Q9P2K6 505 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 AGAP5A6NIR3 686 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 FFAR1O14842 300 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 UPK1BO75841 260 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 DNAJB5O75953 348 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 BMPR1AP36894 532 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 WDR5P61964 334 aaKnown RBP16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 RACK1P63244 317 aaKnown RBP16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 TMIGD1Q6UXZ0 262 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 MSANTD1Q6ZTZ1 278 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 USP43Q70EL4 1123 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 TECPR1Q7Z6L1 1165 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 C12orf76Q8N812 135 aaPredicted RBP16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 DOK4Q8TEW6 326 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 PRUNE2Q8WUY3 3088 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 FCRL1Q96LA6 429 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 QRSL1Q9H0R6 528 aaKnown RBP16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 MOSPD1Q9UJG1 213 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 POFUT2Q9Y2G5 429 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 CHD9Q3L8U1 2897 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 NOTOA8MTQ0 251 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 M0R3H8 397 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 EIF3FO00303 357 aaPredicted RBP16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 TFECO14948 347 aaPredicted RBP16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 GPR37L1O60883 481 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 IFNW1P05000 195 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 ATXN8OSP0DMR3 200 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 ANXA8P13928 327 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 DSTNP60981 165 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 ZNF750Q32MQ0 723 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 ZMAT1Q5H9K5 638 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 ZDHHC20Q5W0Z9 365 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 LACC1Q8IV20 430 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 ZNF547Q8IVP9 402 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 OR9A1PQ8NGU1 263 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 COL21A1Q96P44 957 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 PIP5K1AQ99755 562 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 GABARAPL3Q9BY60 117 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 NLNQ9BYT8 704 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 OSGEPL1Q9H4B0 414 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 CCDC177Q9NQR7 707 aaPredicted RBP16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 TVP23BQ9NYZ1 205 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 HCN4Q9Y3Q4 1203 aa16.23■□□□□ 0.19
SNRNP70-202ENST00000401730 HELZP42694 1942 aaKnown RBP16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 CDC42P60953 191 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 ST8SIA6P61647 398 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 FNDC3BQ53EP0 1204 aaKnown RBP16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 SHFQ7M4L6 423 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 MMAAQ8IVH4 418 aaKnown RBP16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 TCEANCQ8N8B7 351 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 SLC38A5Q8WUX1 472 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 TMEM19Q96HH6 336 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 BRF2Q9HAW0 419 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 SLC23A2Q9UGH3 650 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 CLDN24A6NM45 220 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 ARHGAP33O14559 1287 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 UGDHO60701 494 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 ADH1AP07327 375 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 EPCAMP16422 314 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 MMP12P39900 470 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 OPRD1P41143 372 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 RNF144AP50876 292 aaPredicted RBP16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 MAPK12P53778 367 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 OR4C15Q8NGM1 316 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 JPH3Q8WXH2 748 aaPredicted RBP16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 ZNF689Q96CS4 500 aaPredicted RBP16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 HOXD1Q9GZZ0 328 aa16.22■□□□□ 0.19
SNRNP70-202ENST00000401730 PRRT4C9JH25 899 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 AP3D1O14617 1153 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 FRS3O43559 492 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 SEMA7AO75326 666 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 C8orf89P0DMQ9 161 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 GRK3P35626 688 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 TARDBPQ13148 414 aaKnown RBP eCLIP16.21■□□□□ 0.192e-8■□□□□ 10.8
SNRNP70-202ENST00000401730 NXPE4Q6UWF7 544 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 METTL4Q8N3J2 472 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 EFHD2Q96C19 240 aaPredicted RBP16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 DHRS1Q96LJ7 313 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 ZBP1Q9H171 429 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 GPBP1L1Q9HC44 474 aaPredicted RBP16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 CARD8Q9Y2G2 431 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 KLHL20Q9Y2M5 609 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 DNMT3AQ9Y6K1 912 aaPredicted RBP16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 SYNDIG1LA6NDD5 238 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 ERAL1O75616 437 aaKnown RBP16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 AP2A2O94973 939 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 PPIBP23284 216 aaKnown RBP16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 DGKGP49619 791 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 HNRNPFP52597 415 aaKnown RBP16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 SYPL1Q16563 259 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 FRMPD2BQ6IN97 320 aa16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 CCBE1Q6UXH8 406 aaPredicted RBP16.21■□□□□ 0.19
SNRNP70-202ENST00000401730 OR4D11Q8NGI4 311 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms