RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 MAFFQ9ULX9 164 aa6.48□□□□□ -1.37
CSNK2A1-204ENST00000400227 POLHQ9Y253 713 aa6.48□□□□□ -1.37
CSNK2A1-204ENST00000400227 ATP11BQ9Y2G3 1177 aa6.48□□□□□ -1.37
CSNK2A1-204ENST00000400227 ZNF510Q9Y2H8 683 aa6.48□□□□□ -1.37
CSNK2A1-204ENST00000400227 DOCK6Q96HP0 2047 aa6.48□□□□□ -1.37
CSNK2A1-204ENST00000400227 NUP214P35658 2090 aaPredicted RBP6.48□□□□□ -1.37
CSNK2A1-204ENST00000400227 MTCL1Q9Y4B5 1905 aaKnown RBP6.48□□□□□ -1.37
CSNK2A1-204ENST00000400227 CXorf51AA0A1B0GTR3 108 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 A0A1W2PPW3 197 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 A8MX80 341 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 RNASET2O00584 256 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 SLC16A5O15375 505 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 B4GAT1O43505 415 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 NARSO43776 548 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CST1P01037 141 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CD1AP06126 327 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 C8GP07360 202 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 HTR1AP08908 422 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 SRCP12931 536 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 HOXB6P17509 224 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 MALP21145 153 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 MATN1P21941 496 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 LHCGRP22888 699 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 GCSHP23434 173 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CRHBPP24387 322 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 ZFP36P26651 326 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 SERPINA4P29622 427 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CCR7P32248 378 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 S100A3P33764 101 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 PTGS2P35354 604 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 PIGAP37287 484 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 DCTP40126 519 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CDKN2CP42773 168 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 NSG1P42857 185 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 TMBIM6P55061 237 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CCL23P55773 120 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 GABARAPL2P60520 117 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 SEMG2Q02383 582 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 ABHD18Q0P651 414 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 EPS8Q12929 822 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 NOGQ13253 232 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 ARHGEF7Q14155 803 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 NEDD8Q15843 81 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 ATP13A5Q4VNC0 1218 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 MPPE1Q53F39 396 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 SLC44A4Q53GD3 710 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 ATAT1Q5SQI0 421 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 C6orf141Q5SZD1 244 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 LRRC66Q68CR7 880 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 IGFL4Q6B9Z1 124 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 GCNT7Q6ZNI0 430 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 MSANTD1Q6ZTZ1 278 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 DET1Q7L5Y6 550 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CHST15Q7LFX5 561 aaPredicted RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 ZNF551Q7Z340 670 aaPredicted RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 R3HCC1LQ7Z5L2 792 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 TMC8Q8IU68 726 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CROCCP3Q8IVE0 287 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 BBS7Q8IWZ6 715 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 HS3ST5Q8IZT8 346 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 C8orf59Q8N0T1 100 aaPredicted RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 SPARTQ8N0X7 666 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CLEC4FQ8N1N0 589 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 ZCCHC7Q8N3Z6 543 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 OR2AP1Q8NGE2 309 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 OR56A1Q8NGH5 318 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CLHC1Q8NHS4 586 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 TBC1D15Q8TC07 691 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 SNX19Q92543 992 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 SGCDQ92629 289 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 POP5Q969H6 163 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 FAM162AQ96A26 154 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 RGMAQ96B86 450 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 TESCQ96BS2 214 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 TBC1D20Q96BZ9 403 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 MTFMTQ96DP5 389 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 MVB12AQ96EY5 273 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 SCRN2Q96FV2 425 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 ITCHQ96J02 903 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 ZNF558Q96NG5 402 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 COPS8Q99627 209 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 RBM4BQ9BQ04 359 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 DCUN1D5Q9BTE7 237 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 TBCDQ9BTW9 1192 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 RBM4Q9BWF3 364 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 REXO4Q9GZR2 422 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 GABARAPL1Q9H0R8 117 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 PARVBQ9HBI1 364 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 LTB4R2Q9NPC1 389 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 HPS4Q9NQG7 708 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 MRPL17Q9NRX2 175 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 VNN3Q9NY84 501 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CFAP97Q9P2B7 532 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 LSM7Q9UK45 103 aaKnown RBP6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 NAALAD2Q9Y3Q0 740 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 GMEB1Q9Y692 573 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 PTPRSQ13332 1948 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 SH3PXD2BA1X283 911 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 CDHR4A6H8M9 788 aa6.47□□□□□ -1.37
CSNK2A1-204ENST00000400227 C16orf96A6NNT2 1141 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms