RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 NAT2P11245 290 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 RAB14P61106 215 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 BCL2L1Q07817 233 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 MICAQ29983 383 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 ARMC12Q5T9G4 340 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 OR2G6Q5TZ20 316 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 NOXRED1Q6NXP6 359 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 TMEM145Q8NBT3 493 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 KLHL6Q8WZ60 621 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 RNF208Q9H0X6 261 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 CLEC4MQ9H2X3 399 aaPredicted RBP16.31■□□□□ 0.2
PTPRA-205ENST00000399903 PAK6Q9NQU5 681 aaPredicted RBP16.31■□□□□ 0.2
PTPRA-205ENST00000399903 TVP23BQ9NYZ1 205 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 SPATA2Q9UM82 520 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 MAP4K5Q9Y4K4 846 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 CCDC88CQ9P219 2028 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 XIRP2A4UGR9 3374 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 TEX51A0A1B0GUA7 166 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 GTPBP1O00178 669 aaKnown RBP16.31■□□□□ 0.2
PTPRA-205ENST00000399903 INPPL1O15357 1258 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 TPPPO94811 219 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 GASTP01350 101 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 TRBC1P01850 177 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 HRGP04196 525 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 ICAM2P13598 275 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 GJA1P17302 382 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 CSTF1Q05048 431 aaKnown RBP16.31■□□□□ 0.2
PTPRA-205ENST00000399903 TTLL9Q3SXZ7 439 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 FRMPD2BQ6IN97 320 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 FAM180BQ6P0A1 224 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 SERPINA9Q86WD7 417 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 OR4K1Q8NGD4 311 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 GTPBP2Q9BX10 602 aaKnown RBP16.31■□□□□ 0.2
PTPRA-205ENST00000399903 ASB8Q9H765 288 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 TBC1D17Q9HA65 648 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 CLEC4AQ9UMR7 237 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 MAN2B2Q9Y2E5 1009 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 PRSS21Q9Y6M0 314 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
PTPRA-205ENST00000399903 PIPSLA2A3N6 862 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 TLR4O00206 839 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 YY2O15391 372 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 PRAMEF12O95522 483 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 RGS1Q08116 209 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 KLHL12Q53G59 568 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 GARNL3Q5VVW2 1013 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 FAM122CQ6P4D5 195 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 BHLHB9Q6PI77 547 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 CASP12Q6UXS9 341 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 C9orf62Q8N4C0 152 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 NFKBIDQ8NI38 313 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 ADGRE3Q9BY15 652 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 TM6SF2Q9BZW4 377 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 ZNF624Q9P2J8 865 aaPredicted RBP16.3■□□□□ 0.2
PTPRA-205ENST00000399903 DOCK6Q96HP0 2047 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 LOC105369274A0A096LPK9 316 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 SH3BP5O60239 455 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 ACSL4O60488 711 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 HOXD9P28356 352 aaPredicted RBP16.3■□□□□ 0.2
PTPRA-205ENST00000399903 GKP32189 559 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 PTGER3P43115 390 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 PER3P56645 1201 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 HKDC1Q2TB90 917 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 IFI44LQ53G44 452 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 ARSKQ6UWY0 536 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 WDR53Q7Z5U6 358 aaPredicted RBP16.3■□□□□ 0.2
PTPRA-205ENST00000399903 OR4N4Q8N0Y3 316 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 BEST4Q8NFU0 473 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 GATAD2BQ8WXI9 593 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 ST8SIA2Q92186 375 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 SLC25A46Q96AG3 418 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 CDCA4Q9BXL8 241 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 B3GAT2Q9NPZ5 323 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 EIF3KQ9UBQ5 218 aaKnown RBP16.3■□□□□ 0.2
PTPRA-205ENST00000399903 NCKAP1Q9Y2A7 1128 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 DOCK4Q8N1I0 1966 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 EBLN1P0CF75 366 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 PRPS2P11908 318 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 ZNF30P17039 623 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 IL32P24001 234 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 CRYBA2P53672 197 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 HSPA14Q0VDF9 509 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 TEX261Q6UWH6 196 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 CARNMT1Q8N4J0 409 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 C11orf65Q8NCR3 313 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 TMEM80Q96HE8 168 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 KCTD7Q96MP8 289 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 TSSK6Q9BXA6 273 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 U3KQ87 197 aa16.3■□□□□ 0.2
PTPRA-205ENST00000399903 GNG14A0A1W2PPG7 69 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 INSIG1O15503 277 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 OR10H3O60404 316 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 SOAT1P35610 550 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 COX20Q5RI15 118 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 CFAP77Q6ZQR2 320 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 TRIM46Q7Z4K8 759 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 TEX26Q8N6G2 289 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.29■□□□□ 0.25e-7■■■■■ 65.3
PTPRA-205ENST00000399903 PLEKHB1Q9UF11 243 aaPredicted RBP16.29■□□□□ 0.2
PTPRA-205ENST00000399903 IGLV3-10A0A075B6K4 115 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms