RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 SAP18O00422 153 aaKnown RBP13.34□□□□□ -0.27
APOB-202ENST00000399256 OR2B3O76000 313 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 APOL3O95236 402 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 IFNW1P05000 195 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 CPN2P22792 545 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 UQCRC1P31930 480 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 MLLT11Q13015 90 aaPredicted RBP13.34□□□□□ -0.27
APOB-202ENST00000399256 NAE1Q13564 534 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 CDH18Q13634 790 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 NCF4Q15080 339 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 SEC23BQ15437 767 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 SLC5A12Q1EHB4 618 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 MEDAGQ5VYS4 303 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 OTOP2Q7RTS6 562 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 SAMD11Q96NU1 681 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 COQ7Q99807 217 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 SAGE1Q9NXZ1 904 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 NLKQ9UBE8 527 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 REV1Q9UBZ9 1251 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 SPIN1Q9Y657 262 aaPredicted RBP13.34□□□□□ -0.27
APOB-202ENST00000399256 INPPL1O15357 1258 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 FKTNO75072 461 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 TSC22D2O75157 780 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 GNRH1P01148 92 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 IL1AP01583 271 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 CYP2A6P11509 494 aaPredicted RBP13.33□□□□□ -0.27
APOB-202ENST00000399256 RHCEP18577 417 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 RPS13P62277 151 aaKnown RBP13.33□□□□□ -0.27
APOB-202ENST00000399256 SNRPGP62308 76 aaKnown RBP13.33□□□□□ -0.27
APOB-202ENST00000399256 BNC1Q01954 994 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 RPS26P11Q5JNZ5 115 aaPredicted RBP13.33□□□□□ -0.27
APOB-202ENST00000399256 ATAT1Q5SQI0 421 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 TRIQKQ629K1 86 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 FAM180BQ6P0A1 224 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 CASP12Q6UXS9 341 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 PLCZ1Q86YW0 608 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 C19orf18Q8NEA5 215 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 HUS1BQ8NHY5 278 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 RAET1EQ8TD07 263 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 KLHL21Q9UJP4 597 aa13.33□□□□□ -0.27
APOB-202ENST00000399256 GFYI3L273 518 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 ADAM12O43184 909 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 SLC2A2P11168 524 aaPredicted RBP13.33□□□□□ -0.28
APOB-202ENST00000399256 OSMP13725 252 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 ZNF8P17098 575 aaPredicted RBP13.33□□□□□ -0.28
APOB-202ENST00000399256 TIA1P31483 386 aaKnown RBP eCLIP13.33□□□□□ -0.285e-6■■■□□ 16
APOB-202ENST00000399256 CYP4F8P98187 520 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 EEF1A2Q05639 463 aaKnown RBP13.33□□□□□ -0.28
APOB-202ENST00000399256 CCSMST1Q4G0I0 132 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 FLYWCH1Q4VC44 716 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 CEACAM20Q6UY09 585 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 CAMKMTQ7Z624 323 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 PDZD3Q86UT5 571 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 TMC8Q8IU68 726 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 C1GALT1C1Q96EU7 318 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 MCOLN1Q9GZU1 580 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 MCUBQ9NWR8 336 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 RPL36Q9Y3U8 105 aaKnown RBP13.33□□□□□ -0.28
APOB-202ENST00000399256 OR51B4Q9Y5P0 310 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 DSPPQ9NZW4 1301 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 AGAP14A8MT82 685 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 OR10H3O60404 316 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 NOS1APO75052 506 aaPredicted RBP13.33□□□□□ -0.28
APOB-202ENST00000399256 PDE9AO76083 593 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 MYCP01106 439 aaPredicted RBP13.33□□□□□ -0.28
APOB-202ENST00000399256 C1QBP02746 253 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 RPL17P18621 184 aaKnown RBP13.33□□□□□ -0.28
APOB-202ENST00000399256 ETV5P41161 510 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 GSTM5P46439 218 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 ETV1P50549 477 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 XKP51811 444 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 RAB25P57735 213 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 RPS25P62851 125 aaKnown RBP13.33□□□□□ -0.28
APOB-202ENST00000399256 RBBP4Q09028 425 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 LRRC74AQ0VAA2 488 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 PUM1Q14671 1186 aaKnown RBP eCLIP13.33□□□□□ -0.28
APOB-202ENST00000399256 UAP1L1Q3KQV9 507 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 CRB2Q5IJ48 1285 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 TRIM40Q6P9F5 258 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 HS6ST3Q8IZP7 471 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 CLDN22Q8N7P3 220 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 PROKR2Q8NFJ6 384 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 PXYLP1Q8TE99 480 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 LINC01599Q8WXQ3 324 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 ZBED6CLQ96FA7 236 aaPredicted RBP13.33□□□□□ -0.28
APOB-202ENST00000399256 WRAP53Q9BUR4 548 aaKnown RBP13.33□□□□□ -0.28
APOB-202ENST00000399256 HDHD5Q9BXW7 423 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 BRD9Q9H8M2 597 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 TRIM45Q9H8W5 580 aaPredicted RBP13.33□□□□□ -0.28
APOB-202ENST00000399256 TVP23BQ9NYZ1 205 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 MAT2BQ9NZL9 334 aa13.33□□□□□ -0.28
APOB-202ENST00000399256 PCM1Q15154 2024 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 BRCA2P51587 3418 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 HEPACAM2A8MVW5 462 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 KPNA5O15131 536 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 SEC14L5O43304 696 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 SLC9A3P48764 834 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 GATMP50440 423 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 TNK1Q13470 666 aa13.32□□□□□ -0.28
APOB-202ENST00000399256 P2RY14Q15391 338 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms