RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TSSK6Q9BXA6 273 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 ERVK-18Q9QC07 812 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 SLCO3A1Q9UIG8 710 aa13.68□□□□□ -0.22
PCDHA11-201ENST00000398640 ZBTB42B2RXF5 422 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 PRAMEF26H0Y7S4 382 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC7A9P82251 487 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 DSG2Q14126 1118 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 OR2T5Q6IEZ7 315 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 NPAS3Q8IXF0 933 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 OR4K14Q8NGD5 310 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 OR2T29Q8NH02 315 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 IL17FQ96PD4 163 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC29A3Q9BZD2 475 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 DERL2Q9GZP9 239 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 NLE1Q9NVX2 485 aaPredicted RBP13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 ZIM2Q9NZV7 527 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 ACOX3O15254 700 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 ADRB3P13945 408 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 TANGO2Q6ICL3 276 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 RNF111Q6ZNA4 994 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 NATD1Q8N6N6 113 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 STON2Q8WXE9 905 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 UHRF1Q96T88 793 aaPredicted RBP13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 TPT1P8Q9HAU6 139 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 ZDHHC18Q9NUE0 388 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 FKBP14Q9NWM8 211 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 CXXC1Q9P0U4 656 aaPredicted RBP13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 MYH4Q9Y623 1939 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 FARS2O95363 451 aaKnown RBP13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 STC1P52823 247 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 DEFB110Q30KQ9 67 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 C15orf39Q6ZRI6 1047 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 KCNJ9Q92806 393 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 PYURFQ96I23 114 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 KLF16Q9BXK1 252 aaPredicted RBP13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC6A15Q9H2J7 730 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 WDR45Q9Y484 360 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 C13orf42A0A1B0GVH6 325 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 A0A1B0GVI7 797 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 C6P13671 934 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 XRCC1P18887 633 aaPredicted RBP13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 FECHP22830 423 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 PMS2P3Q13401 168 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 DEFB134Q4QY38 66 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 HTR3DQ70Z44 454 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 C3orf58Q8NDZ4 430 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 OSBPL7Q9BZF2 842 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 OR51I1Q9H343 314 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 TIMMDC1Q9NPL8 285 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 TAS2R9Q9NYW1 312 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 MYH7P12883 1935 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 P04436 131 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 CHRM1P11229 460 aaPredicted RBP13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 PIK3CBP42338 1070 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 PGGT1BP53609 377 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 POU6F2P78424 691 aaPredicted RBP13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 TGFBIQ15582 683 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 TPRG1LQ5T0D9 272 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 TMED4Q7Z7H5 227 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 CSNK1A1LQ8N752 337 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 FCGR1BQ92637 280 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC7A6OSQ96CW6 309 aaPredicted RBP13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 MND1Q9BWT6 205 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 TMED5Q9Y3A6 229 aa13.67□□□□□ -0.22
PCDHA11-201ENST00000398640 HTR3EA5X5Y0 456 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 SPARCP09486 303 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 NR2C1P13056 603 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 KLHDC10Q6PID8 442 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 PLXDC1Q8IUK5 500 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 FANK1Q8TC84 345 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 MOCOSQ96EN8 888 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 A6NLC8 198 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 ACOT7O00154 380 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 VNN2O95498 520 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 NRROSQ86YC3 692 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 GALNT15Q8N3T1 639 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 ZNF283Q8N7M2 679 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 GLYATL1Q969I3 302 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 MSLNLQ96KJ4 702 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 ZBTB20Q9HC78 741 aaPredicted RBP13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 ASB6Q9NWX5 421 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 CLDN25C9JDP6 229 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 HTR1AP08908 422 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 VAMP1P23763 118 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 GADD45AP24522 165 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 ZC3H3Q8IXZ2 948 aaKnown RBP13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 NINJ1Q92982 152 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 TRIM36Q9NQ86 728 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 K7ERQ8 282 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 EBLN1P0CF75 366 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 CDH15P55291 814 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 ADAM17P78536 824 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 ALG10Q5BKT4 473 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 ZNF572Q7Z3I7 529 aaPredicted RBP13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 ZNF227Q86WZ6 799 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 OR8S1Q8NH09 359 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 PEX11GQ96HA9 241 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 ENY2Q9NPA8 101 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 TIGARQ9NQ88 270 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 DNAJC27Q9NZQ0 273 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms