RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 PCDHGA2Q9Y5H1 932 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 ALG5Q9Y673 324 aa15.27■□□□□ 0.03
CHMP1A-201ENST00000397901 NPIPB8E9PQR5 432 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 SOCS5O75159 536 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 IGSF6O95976 241 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 IFNA16P05015 189 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 LHCGRP22888 699 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 STK19P49842 368 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 PER3P56645 1201 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 RAB25P57735 213 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 PTSQ03393 145 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 COX20Q5RI15 118 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 C10orf62Q5T681 223 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 ARSKQ6UWY0 536 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 ZNF852Q6ZMS4 543 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 PRSS42Q7Z5A4 293 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 LAX1Q8IWV1 398 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 C11orf65Q8NCR3 313 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 FOXJ1Q92949 421 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 VN1R3Q9BXE9 311 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 PPA2Q9H2U2 334 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 PAK6Q9NQU5 681 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 MS4A12Q9NXJ0 267 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 ATP6V1HQ9UI12 483 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 C1orf226A1L170 272 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 A8MUA0 341 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 J3KTA2 159 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 ADAMDEC1O15204 470 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 TSC22D2O75157 780 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 TNFRSF21O75509 655 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 ZNF821O75541 412 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 ANXA4P09525 319 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 ETFAP13804 333 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 DDCP20711 480 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 PCGF2P35227 344 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 DGKEP52429 567 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 SELENOWP63302 87 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 TEKQ02763 1124 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 CSTF3Q12996 717 aaKnown RBP15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 MRPL28Q13084 256 aaKnown RBP15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 DOC2AQ14183 400 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 DMC1Q14565 340 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 EIF4HQ15056 248 aaKnown RBP15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 MED22Q15528 200 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 FAM131AQ6UXB0 335 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 NPAS3Q8IXF0 933 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 OR8H3Q8N146 312 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 C9orf62Q8N4C0 152 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 GDPD1Q8N9F7 314 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 NLGN4YQ8NFZ3 816 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 OR4A15Q8NGL6 344 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 MED8Q96G25 268 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 OR5M11Q96RB7 305 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 SPNS1Q9H2V7 528 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 MAPRE3Q9UPY8 281 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 CMAHPQ9Y471 501 aa15.26■□□□□ 0.03
CHMP1A-201ENST00000397901 PRR23AA6NEV1 266 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 CXCL10P02778 98 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 ADRA2AP08913 450 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 CSF3P09919 207 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 RORCP51449 518 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 HOXC5Q00444 222 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 RIN1Q13671 783 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 GLYR1Q49A26 553 aaPredicted RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 BRAT1Q6PJG6 821 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 TPRG1Q6ZUI0 275 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 ARL14EPQ8N8R7 260 aaPredicted RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 B3GNT7Q8NFL0 401 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 C9orf43Q8TAL5 461 aaPredicted RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 WDR20Q8TBZ3 569 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 GTPBP3Q969Y2 492 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 TCF25Q9BQ70 676 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 ASPNQ9BXN1 380 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 TRIM45Q9H8W5 580 aaPredicted RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 ZNF304Q9HCX3 659 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 IL20Q9NYY1 176 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 ZNF106Q9H2Y7 1883 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 DPM1O60762 260 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 PQBP1O60828 265 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 RFPL3O75679 317 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 CTSOP43234 321 aaPredicted RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 RAE1P78406 368 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 RHAGQ02094 409 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 TSTQ16762 297 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 PDZK1Q5T2W1 519 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 SHEQ5VZ18 495 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 SAXO2Q658L1 398 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 TEX261Q6UWH6 196 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 THOC6Q86W42 341 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 ATCAYQ86WG3 371 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 ANKRD53Q8N9V6 530 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 OR4K1Q8NGD4 311 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 ADAMTS19Q8TE59 1207 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 GPR137Q96N19 417 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 UQCC2Q9BRT2 126 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 BARHL1Q9BZE3 327 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 SGK2Q9HBY8 427 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 SPATA6Q9NWH7 488 aaPredicted RBP15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 ZNF224Q9NZL3 707 aa15.25■□□□□ 0.03
CHMP1A-201ENST00000397901 POFUT2Q9Y2G5 429 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms