RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ZNF71Q9NQZ8 489 aaPredicted RBP12.53□□□□□ -0.4
SEC13-209ENST00000397117 LOC101059948A0A1B0GTJ6 334 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 AIM2O14862 343 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 EEDO75530 441 aaKnown RBP12.52□□□□□ -0.4
SEC13-209ENST00000397117 IL6P05231 212 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 ZNF888P0CJ79 500 aaPredicted RBP12.52□□□□□ -0.4
SEC13-209ENST00000397117 HIST1H1TP22492 207 aaPredicted RBP12.52□□□□□ -0.4
SEC13-209ENST00000397117 TPP2P29144 1249 aaPredicted RBP12.52□□□□□ -0.4
SEC13-209ENST00000397117 IL12AP29459 219 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 GSTM5P46439 218 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 RAB15P59190 212 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 TAS2R50P59544 299 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 BTN3A2P78410 334 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 ACTN3Q08043 901 aaPredicted RBP12.52□□□□□ -0.4
SEC13-209ENST00000397117 ART3Q13508 389 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 TIGD2Q4W5G0 525 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 TCTE1Q5JU00 501 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 IKBIPQ70UQ0 350 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 TIPARPQ7Z3E1 657 aaKnown RBP12.52□□□□□ -0.4
SEC13-209ENST00000397117 UTP15Q8TED0 518 aaKnown RBP12.52□□□□□ -0.4
SEC13-209ENST00000397117 RCN3Q96D15 328 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 AICDAQ9GZX7 198 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 LHX9Q9NQ69 397 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 SEMA5BQ9P283 1151 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 WBP11Q9Y2W2 641 aaKnown RBP12.52□□□□□ -0.4
SEC13-209ENST00000397117 NDUFAF1Q9Y375 327 aa12.52□□□□□ -0.4
SEC13-209ENST00000397117 RP1L1Q8IWN7 2480 aaPredicted RBP12.52□□□□□ -0.41
SEC13-209ENST00000397117 NBPF19A0A087WUL8 3843 aa12.52□□□□□ -0.41
SEC13-209ENST00000397117 A0A1W2PP18 115 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 GYG2O15488 501 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 CFLARO15519 480 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 HCRTR1O43613 425 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 GUCY1B2O75343 617 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 COX7A2P14406 83 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 ALOX12P18054 663 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 NELFEP18615 380 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 ATP5A1P25705 553 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 PTPN4P29074 926 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 RPL3P39023 403 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 NUDT2P50583 147 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 MC2RQ01718 297 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 C2orf80Q0P641 193 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 CDC20Q12834 499 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 KCNAB1Q14722 419 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 SLC9A5Q14940 896 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 DPY19L1Q2PZI1 675 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 PGS1Q32NB8 556 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 FAM174BQ3ZCQ3 159 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 REP15Q6BDI9 236 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 TMEM214Q6NUQ4 689 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 RIPOR1Q6ZS17 1223 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 ARHGAP22Q7Z5H3 698 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 R3HCC1LQ7Z5L2 792 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 NLGN4XQ8N0W4 816 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 D2HGDHQ8N465 521 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 FAM26EQ8N5C1 309 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 ACOT4Q8N9L9 421 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 PCYOX1LQ8NBM8 494 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 NLGN4YQ8NFZ3 816 aaPredicted RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 OR8K5Q8NH50 307 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 KLHL6Q8WZ60 621 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 VPS33AQ96AX1 596 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 TESCQ96BS2 214 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 KLHL29Q96CT2 875 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 ABHD17AQ96GS6 310 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 SLC41A2Q96JW4 573 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 TEFMQ96QE5 360 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 NPAS2Q99743 824 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 ZNF768Q9H5H4 540 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 GPN2Q9H9Y4 310 aaPredicted RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 FANCEQ9HB96 536 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 MYNNQ9NPC7 610 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 PRDM7Q9NQW5 492 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 MDC1Q14676 2089 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 A0A0A6YYD5 115 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 C4orf51C9J302 202 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 SCAMP2O15127 329 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 DNAJC8O75937 253 aaPredicted RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 PGRP06401 933 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 IL3P08700 152 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 KRT16P08779 473 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 ANKRD34CP0C6C1 535 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 FAM58BPP0C7Q3 252 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 CAPN3P20807 821 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 S100A3P33764 101 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 ZFP36L2P47974 494 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 MTTPP55157 894 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 C21orf58P58505 322 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 TRA2BP62995 288 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 SRSF11Q05519 484 aaKnown RBP12.51□□□□□ -0.41
SEC13-209ENST00000397117 SLAMF1Q13291 335 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 HEPACAMQ14CZ8 416 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 NDUFA9Q16795 377 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 DEFB134Q4QY38 66 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 SPANXN4Q5MJ08 99 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 CPTPQ5TA50 214 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 ZNF793Q6ZN11 406 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 RINLQ6ZS11 566 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 ASRGL1Q7L266 308 aa12.51□□□□□ -0.41
SEC13-209ENST00000397117 RIMKLAQ8IXN7 391 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms