RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ATP5HO75947 161 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 SIX3O95343 332 aaPredicted RBP13.65□□□□□ -0.22
SEC13-208ENST00000397109 TGFB1P01137 390 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 ATP5F1P24539 256 aaPredicted RBP13.65□□□□□ -0.22
SEC13-208ENST00000397109 EEF1DP29692 281 aaKnown RBP13.65□□□□□ -0.22
SEC13-208ENST00000397109 LIM2P55344 173 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 SLC26A5P58743 744 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 ASPHQ12797 758 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 AP5B1Q2VPB7 878 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 PRR30Q53SZ7 412 aaPredicted RBP13.65□□□□□ -0.22
SEC13-208ENST00000397109 DEPDC1Q5TB30 811 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 KHDRBS2Q5VWX1 349 aaKnown RBP13.65□□□□□ -0.22
SEC13-208ENST00000397109 RPUSD3Q6P087 351 aaKnown RBP13.65□□□□□ -0.22
SEC13-208ENST00000397109 L3MBTL4Q8NA19 623 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 C7orf57Q8NEG2 295 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 HUS1BQ8NHY5 278 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 ATP6V1E2Q96A05 226 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 CCDC126Q96EE4 140 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 SLCO1B3Q9NPD5 702 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 NECTIN3Q9NQS3 549 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 PRTFDC1Q9NRG1 225 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 AGPAT4Q9NRZ5 378 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 SPACA6W5XKT8 324 aa13.65□□□□□ -0.22
SEC13-208ENST00000397109 BLACEA4D250 179 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 SAGE2PA6NJ88 616 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 DLX3O60479 287 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 ZIC2O95409 532 aaPredicted RBP13.64□□□□□ -0.23
SEC13-208ENST00000397109 CLDN9O95484 217 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 MAOAP21397 527 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 BGNP21810 368 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 ATP5A1P25705 553 aaKnown RBP13.64□□□□□ -0.23
SEC13-208ENST00000397109 PTX3P26022 381 aaPredicted RBP13.64□□□□□ -0.23
SEC13-208ENST00000397109 CERS1P27544 350 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 TNFSF10P50591 281 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 ARFIP1P53367 373 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 ZNF33BQ06732 778 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 STX3Q13277 289 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 MEP1AQ16819 746 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 UBE3DQ7Z6J8 389 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 CRLF3Q8IUI8 442 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 SLC22A9Q8IVM8 553 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 SCUBE1Q8IWY4 988 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 SLC5A8Q8N695 610 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 CATSPER1Q8NEC5 780 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 OR1N1Q8NGS0 311 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 SUN3Q8TAQ9 357 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 RGMAQ96B86 450 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 MAGEB10Q96LZ2 347 aaPredicted RBP13.64□□□□□ -0.23
SEC13-208ENST00000397109 NTMT1Q9BV86 223 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.64□□□□□ -0.237e-9■■□□□ 12.4
SEC13-208ENST00000397109 C12orf65Q9H3J6 166 aaKnown RBP13.64□□□□□ -0.23
SEC13-208ENST00000397109 DMRT3Q9NQL9 472 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 ASF1BQ9NVP2 202 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 PLA2G3Q9NZ20 509 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 FLNBO75369 2602 aaKnown RBP13.64□□□□□ -0.23
SEC13-208ENST00000397109 CPAMD8Q8IZJ3 1885 aa13.64□□□□□ -0.23
SEC13-208ENST00000397109 OR5H15A6NDH6 313 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 CYR61O00622 381 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 SCELO95171 688 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 WDPCPO95876 746 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 SERPINE1P05121 402 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 RPS17P08708 135 aaKnown RBP13.63□□□□□ -0.23
SEC13-208ENST00000397109 MYL2P10916 166 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 CPA3P15088 417 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 HIST1H1TP22492 207 aaPredicted RBP13.63□□□□□ -0.23
SEC13-208ENST00000397109 ARL1P40616 181 aaPredicted RBP13.63□□□□□ -0.23
SEC13-208ENST00000397109 SSR2P43308 183 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 CCNG1P51959 295 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 RAP1GDS1P52306 607 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 HK2P52789 917 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 DNAJB13P59910 316 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 HERVK_113P63132 956 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 OCRLQ01968 901 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 SLC13A2Q13183 592 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 DDX39BQ13838 428 aaKnown RBP13.63□□□□□ -0.23
SEC13-208ENST00000397109 PCLAFQ15004 111 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 CHI3L2Q15782 390 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 CPSF6Q16630 551 aaKnown RBP eCLIP13.63□□□□□ -0.23
SEC13-208ENST00000397109 GALNTL6Q49A17 601 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 ACER2Q5QJU3 275 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 C10orf62Q5T681 223 aaPredicted RBP13.63□□□□□ -0.23
SEC13-208ENST00000397109 OR4C11Q6IEV9 310 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 LGI4Q8N135 537 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 ACOT4Q8N9L9 421 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 FAM47BQ8NA70 645 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 OR6Y1Q8NGX8 325 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 PPP1R14CQ8TAE6 165 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 ELP5Q8TE02 316 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 C10orf82Q8WW14 230 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 L3HYPDHQ96EM0 354 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 C19orf60Q96EN9 201 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 MTERF1Q99551 399 aaKnown RBP13.63□□□□□ -0.23
SEC13-208ENST00000397109 BARD1Q99728 777 aaKnown RBP13.63□□□□□ -0.23
SEC13-208ENST00000397109 ERVK-6Q9BXR3 956 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 OR51B5Q9H339 312 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 NOL11Q9H8H0 719 aaKnown RBP13.63□□□□□ -0.23
SEC13-208ENST00000397109 OXSMQ9NWU1 459 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 KCMF1Q9P0J7 381 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 PCTPQ9UKL6 214 aa13.63□□□□□ -0.23
SEC13-208ENST00000397109 PRDM4Q9UKN5 801 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms