RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ZFAND4Q86XD8 727 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SLC15A3Q8IY34 581 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF366Q8N895 744 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PMM1Q92871 262 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 ZC3H10Q96K80 434 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MYNNQ9NPC7 610 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MAST2Q6P0Q8 1798 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MIA3Q5JRA6 1907 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SOBPA7XYQ1 873 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SCGB1D2O95969 90 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 CHRM1P11229 460 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 LCN1P31025 176 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 HNRNPKP61978 463 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 ALG10BQ5I7T1 473 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 CDKL4Q5MAI5 379 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF367Q7RTV3 350 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 OR9I1Q8NGQ6 314 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 NECTIN4Q96NY8 510 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 NAA11Q9BSU3 229 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 NPLQ9BXD5 320 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SIX4Q9UIU6 781 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 RNF6Q9Y252 685 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 FARSAQ9Y285 508 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 E7ESA3 106 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 EMC8O43402 210 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SLITRK5O94991 958 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 TYRP1P17643 537 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 GLP1RP43220 463 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SCAPQ12770 1279 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 GK3PQ14409 553 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PCBP2Q15366 365 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 DHCR24Q15392 516 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 OR4K1Q8NGD4 311 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 BORCS6Q96GS4 357 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 NECAB3Q96P71 396 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PEBP4Q96S96 227 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF471Q9BX82 626 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 POLDIP3Q9BY77 421 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 OR51I1Q9H343 314 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 KCNK6Q9Y257 313 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 URB1O60287 2271 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SH3D21A4FU49 640 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 VSTM2BA6NLU5 285 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 FAAHO00519 579 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 EEDO75530 441 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SOX14O95416 240 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SRCP12931 536 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 IFI30P13284 250 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 GSTM2P28161 218 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 GABRA3P34903 492 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 ATP6AP1Q15904 470 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MOGQ16653 247 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MSS51Q4VC12 460 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 HSD17B12Q53GQ0 312 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 OSTM1Q86WC4 334 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 HAVCR2Q8TDQ0 301 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 THAP4Q8WY91 577 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 HPF1Q9NWY4 346 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 RBMX2Q9Y388 322 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SLC22A31A6NKX4 558 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PHYHO14832 338 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 GPR32O75388 356 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 RAD51DO75771 328 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 RASAL1O95294 804 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 C8orf89P0DMQ9 161 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 POLR2CP19387 275 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 VSX2P58304 361 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 RAB8AP61006 207 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SLC36A3Q495N2 470 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PRRT3Q5FWE3 981 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 TMED4Q7Z7H5 227 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MFSD2AQ8NA29 543 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 FOXJ1Q92949 421 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 KCNA7Q96RP8 456 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 TOR3AQ9H497 397 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 C8orf33Q9H7E9 229 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 TAS2R8Q9NYW2 309 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 B4GALT6Q9UBX8 382 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SH2B3Q9UQQ2 575 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PDYNP01213 254 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 OR12D1P0DN82 309 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 FBLP22087 321 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 TIA1P31483 386 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 HMGCLP35914 325 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 EIF1AXP47813 144 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 RAB28P51157 221 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 ANKRD26P1Q6NSI1 321 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 Q6ZVL8 140 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 RAB11FIP2Q7L804 512 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 CARM1Q86X55 608 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 Q8N9G6 341 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 TOR1AIP2Q8NFQ8 470 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 LRRC20Q8TCA0 184 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 C7orf43Q8WVR3 580 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 BMFQ96LC9 184 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PHIPQ8WWQ0 1821 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 TTC34A8MYJ7 566 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 LRRN3E7EW58 273 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 EIF1AYO14602 144 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms