RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 LIPJQ5W064 366 aa17.17■□□□□ 0.34
ERCC2-201ENST00000391941 CEACAM20Q6UY09 585 aa17.17■□□□□ 0.34
ERCC2-201ENST00000391941 TPRG1Q6ZUI0 275 aa17.17■□□□□ 0.34
ERCC2-201ENST00000391941 SIX5Q8N196 739 aa17.17■□□□□ 0.34
ERCC2-201ENST00000391941 ZNF557Q8N988 423 aaPredicted RBP17.17■□□□□ 0.34
ERCC2-201ENST00000391941 SCRN2Q96FV2 425 aa17.17■□□□□ 0.34
ERCC2-201ENST00000391941 RPRD1BQ9NQG5 326 aaKnown RBP17.17■□□□□ 0.34
ERCC2-201ENST00000391941 LRFN2Q9ULH4 789 aa17.17■□□□□ 0.34
ERCC2-201ENST00000391941 PLAGL1Q9UM63 463 aa17.17■□□□□ 0.34
ERCC2-201ENST00000391941 CORO2BQ9UQ03 480 aa17.17■□□□□ 0.34
ERCC2-201ENST00000391941 FABP12A6NFH5 140 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 B4DXG7 233 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 DVL2O14641 736 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 SOCS5O75159 536 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 IGSF6O95976 241 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 CKMP06732 381 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 TSPAN19P0C672 248 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 IMPA1P29218 277 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 TIA1P31483 386 aaKnown RBP eCLIP17.16■□□□□ 0.34
ERCC2-201ENST00000391941 ETV5P41161 510 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 HTR2BP41595 481 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 ETV1P50549 477 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 RORCP51449 518 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 ZNF91Q05481 1191 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 P2RY14Q15391 338 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 TIMM50Q3ZCQ8 353 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 GATAD2BQ8WXI9 593 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 SLC7A6Q92536 515 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 TSSK6Q9BXA6 273 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 RACGAP1Q9H0H5 632 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 KLHL42Q9P2K6 505 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 SNX7Q9UNH6 387 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 YIPF1Q9Y548 306 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 FADS2P1A8MWK0 482 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 PRKYO43930 277 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 KLHL18O94889 574 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 SCG5P05408 212 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 CCNYL3P0C7X3 344 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 PCSK2P16519 638 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 PPIBP23284 216 aaKnown RBP17.16■□□□□ 0.34
ERCC2-201ENST00000391941 TIE1P35590 1138 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 ALDH9A1P49189 494 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 SPINT3P49223 89 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 LARS2Q15031 903 aaKnown RBP17.16■□□□□ 0.34
ERCC2-201ENST00000391941 RFPL4BQ6ZWI9 263 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 USP30Q70CQ3 517 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.16■□□□□ 0.34
ERCC2-201ENST00000391941 OVCA2Q8WZ82 227 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 TMCO6Q96DC7 493 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 CRNNQ9UBG3 495 aaPredicted RBP17.16■□□□□ 0.34
ERCC2-201ENST00000391941 LSM2Q9Y333 95 aaKnown RBP17.16■□□□□ 0.34
ERCC2-201ENST00000391941 CMAHPQ9Y471 501 aa17.16■□□□□ 0.34
ERCC2-201ENST00000391941 A0A0G2JN53 185 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 CCDC182A6NF36 153 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 HEPACAM2A8MVW5 462 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 PRRG1O14668 218 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 PLA2G10O15496 165 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 SH3BP5O60239 455 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 TSC22D2O75157 780 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 MYL9P24844 172 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 PSMA1P25786 263 aaKnown RBP17.15■□□□□ 0.34
ERCC2-201ENST00000391941 SOX18P35713 384 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 MAN2A2P49641 1150 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 C21orf58P58505 322 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 RPS25P62851 125 aaKnown RBP17.15■□□□□ 0.34
ERCC2-201ENST00000391941 GPNMBQ14956 572 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 SYTL3Q4VX76 610 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 GPAT3Q53EU6 434 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 ANXA8L1Q5VT79 327 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 NOXA1Q86UR1 476 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 PHC2Q8IXK0 858 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 C9orf43Q8TAL5 461 aaPredicted RBP17.15■□□□□ 0.34
ERCC2-201ENST00000391941 RIOK2Q9BVS4 552 aaKnown RBP17.15■□□□□ 0.34
ERCC2-201ENST00000391941 SUV39H2Q9H5I1 410 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 NPAP1Q9NZP6 1156 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 CFAP97Q9P2B7 532 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 NDRG2Q9UN36 371 aaKnown RBP17.15■□□□□ 0.34
ERCC2-201ENST00000391941 ITM2BQ9Y287 266 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 SPIN1Q9Y657 262 aaPredicted RBP17.15■□□□□ 0.34
ERCC2-201ENST00000391941 IGLV3-16A0A075B6K0 115 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 PSKH1P11801 424 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 ACLYP53396 1101 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 AP1S2P56377 157 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 SLBPQ14493 270 aaKnown RBP eCLIP17.15■□□□□ 0.34
ERCC2-201ENST00000391941 GPR32P1Q8NGA4 272 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 CHTF18Q8WVB6 975 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 PPCDCQ96CD2 204 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 C1GALT1C1Q96EU7 318 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 SCLYQ96I15 445 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 DHRS1Q96LJ7 313 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 IL17FQ96PD4 163 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 ZNF282Q9UDV7 671 aaPredicted RBP17.15■□□□□ 0.34
ERCC2-201ENST00000391941 STOML2Q9UJZ1 356 aa17.15■□□□□ 0.34
ERCC2-201ENST00000391941 A0A075B6Q4 140 aa17.14■□□□□ 0.34
ERCC2-201ENST00000391941 ANKDD1BA6NHY2 528 aa17.14■□□□□ 0.34
ERCC2-201ENST00000391941 IL3P08700 152 aa17.14■□□□□ 0.34
ERCC2-201ENST00000391941 TEKQ02763 1124 aa17.14■□□□□ 0.34
ERCC2-201ENST00000391941 RUNX1T1Q06455 604 aa17.14■□□□□ 0.34
ERCC2-201ENST00000391941 TARDBPQ13148 414 aaKnown RBP eCLIP17.14■□□□□ 0.341e-9■■■□□ 15.2
ERCC2-201ENST00000391941 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms