RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 LZTS1Q9Y250 596 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SIGLEC9Q9Y336 463 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM184BQ9Y519 407 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ASB3Q9Y575 518 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SPIN1Q9Y657 262 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SPACA6W5XKT8 324 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ACEP12821 1306 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZBED9Q6R2W3 1325 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 RTTNQ86VV8 2226 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 COL4A1P02462 1669 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 VWFP04275 2813 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CRB1P82279 1406 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TNKS1BP1Q9C0C2 1729 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 LAMB4A4D0S4 1761 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 IGKV1-27A0A075B6S5 117 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 IGHV3OR16-12A0A075B7B8 117 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 IGLV1-36A0A0B4J1U3 117 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TRBV4-1A0A0J9YWV2 114 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 hCG_38984A0A1B0GV85 526 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 A0A1B0GVC2 190 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 LOC390937A0A1W2PQ73 354 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ILVBLA1L0T0 632 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ELOVL7A1L3X0 281 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PSMB11A5LHX3 300 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 OR6C70A6NIJ9 312 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 NKX6-3A6NJ46 265 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ENO4A6NNW6 628 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 CLCA1A8K7I4 914 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 YDJCA8MPS7 323 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 SNURFLB1AK76 121 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 D6RAR5 112 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 E7EVH7 732 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 LAD1O00515 517 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 FBP2O00757 339 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 OR7A17O14581 309 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 MAP2K7O14733 419 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 FPGTO14772 594 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PPIP5K2O43314 1243 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 AQP9O43315 295 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PRPF3O43395 683 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 FRS3O43559 492 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 SPRY1O43609 319 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PRC1O43663 620 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PIP5K1CO60331 668 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ECE2O60344 883 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PLA2G6O60733 806 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC19A2O60779 497 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TBL1XO60907 577 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 CSDE1O75534 798 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 LYPLA1O75608 230 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 DDHD2O94830 711 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 HEXIM1O94992 359 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 RAB36O95755 333 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TSPAN13O95857 204 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TIMP1P01033 207 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PDGFBP01127 241 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 MT-ND5P03915 603 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 OPN1MWP04001 364 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 CSF2P04141 144 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ATP1B1P05026 303 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 YES1P07947 543 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ZFYP08048 801 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 SNRPCP09234 159 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 SBK2P0C263 348 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 OPN1MW2P0DN77 364 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 OPN1MW3P0DN78 364 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 MBL2P11226 248 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 MYL4P12829 197 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 RARGP13631 454 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TCF4P15884 667 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ZKSCAN1P17029 563 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PGAM1P18669 254 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ATP2B1P20020 1258 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 DCKP27707 260 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 HTR1BP28222 390 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PRDX3P30048 256 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PPP2R1BP30154 601 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 AKT1P31749 480 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 GTF2F1P35269 517 aaKnown RBP eCLIP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 SERPINF1P36955 418 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ARL1P40616 181 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PNPLA4P41247 253 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 NBL1P41271 181 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 MAGEA12P43365 314 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 CDK7P50613 346 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 MVDP53602 400 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PRRX1P54821 245 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 SH3BGRP55822 239 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 NLRP11P59045 1033 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 RBX1P62877 108 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 GSTO1P78417 241 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 HDLBPQ00341 1268 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 AMPD3Q01432 767 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 GCNT1Q02742 428 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 CD164Q04900 197 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 GFPT1Q06210 699 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 CHRNDQ07001 517 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 BCL2L1Q07817 233 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ACSM1Q08AH1 577 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF415Q09FC8 603 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms