RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PROX2Q3B8N5 592 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 TCTE1Q5JU00 501 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 PRAMEF19Q5SWL8 479 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 FSTL5Q8N475 847 aaPredicted RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 B3GALNT2Q8NCR0 500 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 OR2T11Q8NH01 316 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 TMEM203Q969S6 136 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 SLAMF9Q96A28 289 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 GPR137Q96N19 417 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 ZFP3Q96NJ6 502 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 BCO1Q9HAY6 547 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 ASF1BQ9NVP2 202 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 TAS2R13Q9NYV9 303 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 PTGFRNQ9P2B2 879 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 OR2A25A4D2G3 310 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 WASH4PA8MWX3 477 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 YWHAQP27348 245 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 MTPNP58546 118 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 C10orf120Q5SQS8 335 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 HIST2H2AA3Q6FI13 130 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 GSG1LQ6UXU4 331 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 BVESQ8NE79 360 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 MFSD3Q96ES6 412 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 RNF170Q96K19 258 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 SLC17A6Q9P2U8 582 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 BTRCQ9Y297 605 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 NCF1BA6NI72 391 aaPredicted RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 NCF1CA8MVU1 366 aaPredicted RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 GRID2O43424 1007 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 MED6O75586 246 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 REM1O75628 298 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 KLK3P07288 261 aaPredicted RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 HBQ1P09105 142 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 NCF1P14598 390 aaPredicted RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 NQO2P16083 231 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 NFYAP23511 347 aaPredicted RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 ATP4BP51164 291 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 SLC25A11Q02978 314 aaKnown RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 SGO1Q5FBB7 561 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 ADGRF1Q5T601 910 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 CDC73Q6P1J9 531 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 CNIH2Q6PI25 160 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 GLB1LQ6UWU2 654 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 TRMT11Q7Z4G4 463 aaKnown RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 SPATA19Q7Z5L4 167 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 AMIGO3Q86WK7 504 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 SPPL2BQ8TCT7 592 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 CCM2Q9BSQ5 444 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 YIPF4Q9BSR8 244 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 RPS10P5Q9NQ39 176 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF223Q9UK11 482 aaPredicted RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 KLK4Q9Y5K2 254 aa11.31□□□□□ -0.6
NPHP4-202ENST00000378161 COL14A1Q05707 1796 aaKnown RBP11.31□□□□□ -0.6
NPHP4-202ENST00000378161 FAM74A7A6NL05 159 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 MCIDASD6RGH6 385 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 PPEF2O14830 753 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 USP17L7P0C7H9 530 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 PTGFRP43088 359 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 CCR9P51686 369 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 CLINT1Q14677 625 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 SMAD2Q15796 467 aaKnown RBP11.3□□□□□ -0.6
NPHP4-202ENST00000378161 FAM74A3Q4VXF1 159 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 THRSPQ92748 146 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 DPY30Q9C005 99 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 EIF2B3Q9NR50 452 aaKnown RBP11.3□□□□□ -0.6
NPHP4-202ENST00000378161 ASF1AQ9Y294 204 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 NWD2Q9ULI1 1742 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 NUP98P52948 1817 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 C17orf102A2RUQ5 167 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 FGF10O15520 208 aaPredicted RBP11.3□□□□□ -0.6
NPHP4-202ENST00000378161 MFSD11O43934 449 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 MPZL2O60487 215 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 ALPIP09923 528 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 LINC00032P0C843 101 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 DNAJA1P31689 397 aaKnown RBP11.3□□□□□ -0.6
NPHP4-202ENST00000378161 GABREP78334 506 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 CTBP1Q13363 440 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 TMEM31Q5JXX7 168 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 TAC4Q86UU9 113 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 CMIPQ8IY22 773 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 ADGRF3Q8IZF5 1079 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 TMEM86AQ8N2M4 240 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 TMEM151AQ8N4L1 468 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF671Q8TAW3 534 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 GTF3AQ92664 365 aaKnown RBP11.3□□□□□ -0.6
NPHP4-202ENST00000378161 C14orf79Q96F83 325 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 MRPL45Q9BRJ2 306 aaKnown RBP11.3□□□□□ -0.6
NPHP4-202ENST00000378161 FAM126AQ9BYI3 521 aaPredicted RBP11.3□□□□□ -0.6
NPHP4-202ENST00000378161 ALG9Q9H6U8 611 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 OR6C2Q9NZP2 312 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 TIMM13Q9Y5L4 95 aaPredicted RBP11.3□□□□□ -0.6
NPHP4-202ENST00000378161 PIAS3Q9Y6X2 628 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 CHD4Q14839 1912 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 GSAPA4D1B5 854 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 RAD1O60671 282 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 CAPNS1P04632 268 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 FGF4P08620 206 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 CBSLP0DN79 551 aa11.3□□□□□ -0.6
NPHP4-202ENST00000378161 CBSP35520 551 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms