RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ATG14Q6ZNE5 492 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 LANCL3Q6ZV70 420 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 APIPQ96GX9 242 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 IMMP1LQ96LU5 166 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 LPAR4Q99677 370 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 TUBB1Q9H4B7 451 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 MANSC1Q9H8J5 431 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 THAP1Q9NVV9 213 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 WBP11Q9Y2W2 641 aaKnown RBP12.43□□□□□ -0.42
CKAP2-202ENST00000378034 SCN2AQ99250 2005 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 PCDH7O60245 1069 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 LYPLA1O75608 230 aaPredicted RBP12.42□□□□□ -0.42
CKAP2-202ENST00000378034 MYO1DO94832 1006 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 GBAP04062 536 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 TIA1P31483 386 aaKnown RBP eCLIP12.42□□□□□ -0.42
CKAP2-202ENST00000378034 RPL14P50914 215 aaKnown RBP12.42□□□□□ -0.42
CKAP2-202ENST00000378034 STX4Q12846 297 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 KCNAB2Q13303 367 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 TERF2Q15554 542 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 EXT1Q16394 746 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 SFT2D3Q587I9 215 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 RIPOR1Q6ZS17 1223 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 DDIASQ8IXT1 998 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 GALNT16Q8N428 558 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 SORT1Q99523 831 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 FAIM2Q9BWQ8 316 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 TRIM55Q9BYV6 548 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 ZNF160Q9HCG1 818 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 C1orf109Q9NX04 203 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 PCDHGA9Q9Y5G4 932 aaKnown RBP12.42□□□□□ -0.42
CKAP2-202ENST00000378034 CLDN16Q9Y5I7 305 aa12.42□□□□□ -0.42
CKAP2-202ENST00000378034 C1orf226A1L170 272 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 TMEM233B4DJY2 109 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 ATXN7O15265 892 aaPredicted RBP12.41□□□□□ -0.42
CKAP2-202ENST00000378034 SNNO75324 88 aaPredicted RBP12.41□□□□□ -0.42
CKAP2-202ENST00000378034 SERPINA7P05543 415 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 LINC00032P0C843 101 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 CCL11P51671 97 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 RAE1P78406 368 aaKnown RBP12.41□□□□□ -0.42
CKAP2-202ENST00000378034 IGLV3-21P80748 117 aaPredicted RBP12.41□□□□□ -0.42
CKAP2-202ENST00000378034 BTKQ06187 659 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 NDUFAF5Q5TEU4 345 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 IRAK1BP1Q5VVH5 260 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 C18orf63Q68DL7 685 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 PLAG1Q6DJT9 500 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 OR52E8Q6IFG1 317 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 PAPD4Q6PIY7 484 aaKnown RBP12.41□□□□□ -0.42
CKAP2-202ENST00000378034 Q6ZSR9 355 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 KBTBD2Q8IY47 623 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 ZNF781Q8N8C0 355 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 AGR3Q8TD06 166 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 TM4SF18Q96CE8 201 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 WDR77Q9BQA1 342 aaPredicted RBP12.41□□□□□ -0.42
CKAP2-202ENST00000378034 MESP1Q9BRJ9 268 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 C20orf27Q9GZN8 174 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 LRTM1Q9HBL6 345 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 TMED5Q9Y3A6 229 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 PCDHGB7Q9Y5F8 929 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 MGAQ8IWI9 3026 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 GNG14A0A1W2PPG7 69 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 PIP5K1BO14986 540 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 SEC22BO75396 215 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 AIFM1O95831 613 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 CHAF1BQ13112 559 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 MYBPC3Q14896 1274 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 HSP90B2PQ58FF3 399 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 XKR7Q5GH72 579 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 JMJD6Q6NYC1 403 aaPredicted RBP12.41□□□□□ -0.42
CKAP2-202ENST00000378034 M1APQ8TC57 530 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 ANKRD9Q96BM1 317 aaPredicted RBP12.41□□□□□ -0.42
CKAP2-202ENST00000378034 PPP3R2Q96LZ3 170 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 PELOQ9BRX2 385 aaKnown RBP12.41□□□□□ -0.42
CKAP2-202ENST00000378034 ALOXE3Q9BYJ1 711 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 LHPPQ9H008 270 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 ZNF395Q9H8N7 513 aaPredicted RBP12.41□□□□□ -0.42
CKAP2-202ENST00000378034 ADAP2Q9NPF8 381 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 VTI1BQ9UEU0 232 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 PCDHA9Q9Y5H5 950 aa12.41□□□□□ -0.42
CKAP2-202ENST00000378034 TGFBR3LH3BV60 316 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 LSM1O15116 133 aaKnown RBP12.4□□□□□ -0.42
CKAP2-202ENST00000378034 SEC24DO94855 1032 aaPredicted RBP12.4□□□□□ -0.42
CKAP2-202ENST00000378034 GPR75O95800 540 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 ANXA4P09525 319 aaPredicted RBP12.4□□□□□ -0.42
CKAP2-202ENST00000378034 FAM87AP0C7U9 286 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 DRD2P14416 443 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 ITGA3P26006 1051 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 KIAA0040Q15053 153 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 NR6A1Q15406 480 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 ELAVL1Q15717 326 aaKnown RBP12.4□□□□□ -0.42
CKAP2-202ENST00000378034 NOXRED1Q6NXP6 359 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 PCSK4Q6UW60 755 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 CLNKQ7Z7G1 428 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 HPS6Q86YV9 775 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 TMEM132CQ8N3T6 1108 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 OR2T11Q8NH01 316 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 DNAJB14Q8TBM8 379 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 ZNF75CPQ92670 426 aaPredicted RBP12.4□□□□□ -0.42
CKAP2-202ENST00000378034 FCRL1Q96LA6 429 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 SLC25A23Q9BV35 468 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 MED4Q9NPJ6 270 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms