RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 OR5K3A6NET4 321 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 FADS2P1A8MWK0 482 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 NPC1O15118 1278 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 PQBP1O60828 265 aaKnown RBP13.22□□□□□ -0.29
SF1-205ENST00000377394 CDK1P06493 297 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 HOXD10P28358 340 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 IMPA1P29218 277 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 TIE1P35590 1138 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 OR4A15Q8NGL6 344 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 SAMD11Q96NU1 681 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.22□□□□□ -0.292e-9■■□□□ 11.8
SF1-205ENST00000377394 PCDHGA2Q9Y5H1 932 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 PRAMEF25A6NGN4 478 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 RNASET2O00584 256 aaKnown RBP13.22□□□□□ -0.29
SF1-205ENST00000377394 GRM6O15303 877 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 TSPAN6O43657 245 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 SLC16A8O95907 504 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 OPN1SWP03999 348 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 HLA-EP13747 358 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 KIR2DL3P43628 341 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 BDKRB1P46663 353 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 PREPP48147 710 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 POLR2LP62875 67 aaKnown RBP13.22□□□□□ -0.29
SF1-205ENST00000377394 TEAD4Q15561 434 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 TSTQ16762 297 aaKnown RBP13.22□□□□□ -0.29
SF1-205ENST00000377394 GPR156Q8NFN8 814 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 OR2A12Q8NGT7 310 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 OR56A3Q8NH54 315 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 SPPL2AQ8TCT8 520 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 PCNPQ8WW12 178 aaKnown RBP13.22□□□□□ -0.29
SF1-205ENST00000377394 REPS1Q96D71 796 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 ZNF558Q96NG5 402 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 PKP4Q99569 1192 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 CNPPD1Q9BV87 410 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 SH3BP4Q9P0V3 963 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 ZNF282Q9UDV7 671 aaPredicted RBP13.22□□□□□ -0.29
SF1-205ENST00000377394 SLC25A13Q9UJS0 675 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 MGAT4DA6NG13 374 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 CLCA1A8K7I4 914 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 ADAMDEC1O15204 470 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 TNFRSF21O75509 655 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 GPX5O75715 221 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 PDGFAP04085 211 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 ETFAP13804 333 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 ZNF30P17039 623 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 GABRB1P18505 474 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 SSTR4P31391 388 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 TIA1P31483 386 aaKnown RBP eCLIP13.21□□□□□ -0.292e-7■■■■□ 24.6
SF1-205ENST00000377394 RPS19P39019 145 aaKnown RBP13.21□□□□□ -0.29
SF1-205ENST00000377394 MLLT3P42568 568 aaPredicted RBP13.21□□□□□ -0.29
SF1-205ENST00000377394 SOX9P48436 509 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 CTSCP53634 463 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 CASP9P55211 416 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 DCDC1P59894 354 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 RPS13P62277 151 aaKnown RBP13.21□□□□□ -0.29
SF1-205ENST00000377394 SUZ12Q15022 739 aaKnown RBP13.21□□□□□ -0.29
SF1-205ENST00000377394 SPIN4Q56A73 249 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 TMPRSS11AQ6ZMR5 421 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 KCTD20Q7Z5Y7 419 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 TMCO2Q7Z6W1 182 aaPredicted RBP13.21□□□□□ -0.29
SF1-205ENST00000377394 ABI3BPQ7Z7G0 1075 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 GALNT6Q8NCL4 622 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 FLCNQ8NFG4 579 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 OR10G2Q8NGC3 310 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 GOT1L1Q8NHS2 421 aaPredicted RBP13.21□□□□□ -0.29
SF1-205ENST00000377394 MYLIPQ8WY64 445 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 FRMD6Q96NE9 622 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 RIOK2Q9BVS4 552 aaKnown RBP13.21□□□□□ -0.29
SF1-205ENST00000377394 SRRQ9GZT4 340 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 EXOSC4Q9NPD3 245 aaKnown RBP13.21□□□□□ -0.29
SF1-205ENST00000377394 ASAH2Q9NR71 780 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 EVA1BQ9NVM1 165 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 ZNF226Q9NYT6 803 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 SNX7Q9UNH6 387 aa13.21□□□□□ -0.29
SF1-205ENST00000377394 ATP6V1G2-DDX39BF2Z307 99 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 ICAM2P13598 275 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 ZNF8P17098 575 aaPredicted RBP13.21□□□□□ -0.3
SF1-205ENST00000377394 VIPR1P32241 457 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 HBA1P69905 142 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 HENMT1Q5T8I9 393 aaKnown RBP13.21□□□□□ -0.3
SF1-205ENST00000377394 TMEM25Q86YD3 366 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 CAMKK1Q8N5S9 505 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.21□□□□□ -0.31e-8■□□□□ 10.2
SF1-205ENST00000377394 MYDGFQ969H8 173 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 AIFM2Q9BRQ8 373 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 SLC46A2Q9BY10 475 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 SLC22A4Q9H015 551 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 RNF121Q9H920 327 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 ZNF556Q9HAH1 456 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 DYRK4Q9NR20 520 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 SPASTQ9UBP0 616 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 ATP6V1HQ9UI12 483 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 MAPRE3Q9UPY8 281 aa13.21□□□□□ -0.3
SF1-205ENST00000377394 TRAV19A0A0A6YYK7 116 aa13.2□□□□□ -0.3
SF1-205ENST00000377394 A0A1W2PRU2 124 aa13.2□□□□□ -0.3
SF1-205ENST00000377394 EFCAB10A6NFE3 127 aa13.2□□□□□ -0.3
SF1-205ENST00000377394 PCP4L1A6NKN8 68 aa13.2□□□□□ -0.3
SF1-205ENST00000377394 WASH3PC4AMC7 463 aa13.2□□□□□ -0.3
SF1-205ENST00000377394 CRATP43155 626 aa13.2□□□□□ -0.3
SF1-205ENST00000377394 OR1E2P47887 323 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms