RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 PITHD1Q9GZP4 211 aaPredicted RBP17.81■□□□□ 0.44
CBWD3-204ENST00000377349 VPS11Q9H270 941 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 NPDC1Q9NQX5 325 aaPredicted RBP17.81■□□□□ 0.44
CBWD3-204ENST00000377349 CPSF2Q9P2I0 782 aaKnown RBP17.81■□□□□ 0.44
CBWD3-204ENST00000377349 ACANP16112 2415 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 A0A087X1B8 175 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 KLRC4-KLRK1H3BQV0 150 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 RTCAO00442 366 aaKnown RBP17.81■□□□□ 0.44
CBWD3-204ENST00000377349 ACSL3O95573 720 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 TGFB1P01137 390 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 TPOP07202 933 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 CAPN3P20807 821 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 LIM2P55344 173 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 GPR85P60893 370 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 TFF3Q07654 80 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 WHAMMP3Q1A5X7 153 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 FAM83EQ2M2I3 478 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 UBAP2Q5T6F2 1119 aaKnown RBP17.81■□□□□ 0.44
CBWD3-204ENST00000377349 MED27Q6P2C8 311 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 ABHD17CQ6PCB6 329 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 SPNS3Q6ZMD2 512 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 C16orf47Q6ZP98 133 aaPredicted RBP17.81■□□□□ 0.44
CBWD3-204ENST00000377349 CDH24Q86UP0 819 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 RPRMLQ8N4K4 120 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 OR52N2Q8NGI0 321 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 NCLNQ969V3 563 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 CCDC77Q9BR77 488 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 ZDHHC18Q9NUE0 388 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 NINJ2Q9NZG7 142 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 HRNRQ86YZ3 2850 aaPredicted RBP17.8■□□□□ 0.44
CBWD3-204ENST00000377349 A0A096LPK6 155 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 PINLYPA6NC86 204 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 SYCE1LA8MT33 242 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 K7EPI3 171 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 MPDZO75970 2070 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 C2P06681 752 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 EPB42P16452 691 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 EPORP19235 508 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 TYK2P29597 1187 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 SSR2P43308 183 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 RAP1GDS1P52306 607 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 ABCA4P78363 2273 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 ID2Q02363 134 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 STX4Q12846 297 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 RCN2Q14257 317 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 PFKFB4Q16877 469 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 KLC3Q6P597 504 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 EID3Q8N140 333 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 RNF175Q8N4F7 328 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 UBE2E3Q969T4 207 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 VMP1Q96GC9 406 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 SEC16BQ96JE7 1060 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 QRFPRQ96P65 431 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 KCNC2Q96PR1 638 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 ATOH8Q96SQ7 321 aa17.8■□□□□ 0.44
CBWD3-204ENST00000377349 PRRC2AP48634 2157 aaKnown RBP17.79■□□□□ 0.44
CBWD3-204ENST00000377349 TNNI3P19429 210 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 SERPINB8P50452 374 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 HSD17B7P56937 341 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 ZNF595Q8IYB9 648 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 CENPLQ8N0S6 344 aaPredicted RBP17.79■□□□□ 0.44
CBWD3-204ENST00000377349 TMEM156Q8N614 296 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 UHMK1Q8TAS1 419 aaKnown RBP17.79■□□□□ 0.44
CBWD3-204ENST00000377349 CHTF18Q8WVB6 975 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 SORBS1Q9BX66 1292 aaKnown RBP17.79■□□□□ 0.44
CBWD3-204ENST00000377349 ACTR8Q9H981 624 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 LIN28AQ9H9Z2 209 aaKnown RBP17.79■□□□□ 0.44
CBWD3-204ENST00000377349 COQ3Q9NZJ6 369 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 DAPP1Q9UN19 280 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 RNF6Q9Y252 685 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 IKBKGQ9Y6K9 419 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 CLCA3PQ9Y6N3 262 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 SPACA6W5XKT8 324 aa17.79■□□□□ 0.44
CBWD3-204ENST00000377349 A0A0G2JMM0 328 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 A0A1W2PPB8 328 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 A0A1W2PRS3 328 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 LRRC14BA6NHZ5 514 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 KIR3DP1A8MWS1 328 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 CDC40O60508 579 aaKnown RBP eCLIP17.78■□□□□ 0.44
CBWD3-204ENST00000377349 LDB3O75112 727 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 INHBAP08476 426 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 AP5B1Q2VPB7 878 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 ADPRMQ3LIE5 342 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 CEP128Q6ZU80 1094 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 NOA1Q8NC60 698 aaKnown RBP17.78■□□□□ 0.44
CBWD3-204ENST00000377349 PSD4Q8NDX1 1056 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 UBTD2Q8WUN7 234 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 WDR34Q96EX3 536 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 SCYL1Q96KG9 808 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 MAPKAP1Q9BPZ7 522 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 MS4A8Q9BY19 250 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 OR51B5Q9H339 312 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 KCMF1Q9P0J7 381 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 YARS2Q9Y2Z4 477 aaKnown RBP17.78■□□□□ 0.44
CBWD3-204ENST00000377349 VPS13CQ709C8 3753 aa17.78■□□□□ 0.44
CBWD3-204ENST00000377349 NKX2-6A6NCS4 301 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 CYR61O00622 381 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 TOXO94900 526 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 CPN2P22792 545 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 SSR4P51571 173 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms