RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 MATN2O00339 956 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 IL1RNP18510 177 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 CD72P21854 359 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 PGGT1BP53609 377 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 SRYQ05066 204 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 ABRAXAS2Q15018 415 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 C1orf220Q5T0J3 134 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 Q6ZSR6 202 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 RHEBL1Q8TAI7 183 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 RAB2BQ8WUD1 216 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 MGAT4BQ9UQ53 548 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 BHMG1C9JSJ3 638 aaPredicted RBP13.06□□□□□ -0.32
GPC6-201ENST00000377047 AOC1P19801 751 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 ATP4BP51164 291 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 MAD2L1BPQ15013 274 aaPredicted RBP13.06□□□□□ -0.32
GPC6-201ENST00000377047 ASB18Q6ZVZ8 466 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 HUS1BQ8NHY5 278 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 MS4A4AQ96JQ5 239 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 BOCQ9BWV1 1114 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 HCN4Q9Y3Q4 1203 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 METTL21EPA6NDL7 271 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 ORC5O43913 435 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 KDM4BO94953 1096 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 CPNE6O95741 557 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 RORAP35398 523 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 TMEM35AQ53FP2 167 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 TRIM73Q86UV7 250 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 SLITRK4Q8IW52 837 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 NSMAFQ92636 917 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 DIO2Q92813 273 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 AURKBQ96GD4 344 aaPredicted RBP13.06□□□□□ -0.32
GPC6-201ENST00000377047 METTL8Q9H825 291 aaKnown RBP13.06□□□□□ -0.32
GPC6-201ENST00000377047 PFDN2Q9UHV9 154 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 WASF3Q9UPY6 502 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 MYH13Q9UKX3 1938 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 SCGB1D2O95969 90 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 SLC6A4P31645 630 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 ZMYND11Q15326 602 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 LYSMD4Q5XG99 296 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 FIGNL1Q6PIW4 674 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 UNC5DQ6UXZ4 953 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 TP53INP2Q8IXH6 220 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 ASB15Q8WXK1 588 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 TMEM80Q96HE8 168 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 PKP2Q99959 881 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 NAA11Q9BSU3 229 aaPredicted RBP13.06□□□□□ -0.32
GPC6-201ENST00000377047 ADAMTS5Q9UNA0 930 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 HBQ1P09105 142 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 PRSS56P0CW18 603 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 FGF3P11487 239 aaPredicted RBP13.06□□□□□ -0.32
GPC6-201ENST00000377047 HMGCLP35914 325 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 GRB7Q14451 532 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 C15orf39Q6ZRI6 1047 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 TCEANCQ8N8B7 351 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 ERMAPQ96PL5 475 aaPredicted RBP13.06□□□□□ -0.32
GPC6-201ENST00000377047 PTGDR2Q9Y5Y4 395 aa13.06□□□□□ -0.32
GPC6-201ENST00000377047 ARL6IP5O75915 188 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 FCER2P06734 321 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 HSD3B1P14060 373 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 HSD3B2P26439 372 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 ARSDP51689 593 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 NELL2Q99435 816 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 BARD1Q99728 777 aaKnown RBP13.05□□□□□ -0.32
GPC6-201ENST00000377047 ITPAQ9BY32 194 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 A0A096LPI6 279 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 PGCP20142 388 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 P2RY2P41231 377 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 WNT7BP56706 349 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 ROR2Q01974 943 aaKnown RBP13.05□□□□□ -0.32
GPC6-201ENST00000377047 CBLBQ13191 982 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 NR0B2Q15466 257 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 UNC50Q53HI1 259 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 APOOQ9BUR5 198 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 LOC100509620A0A075B734 347 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 PRAMEF26H0Y7S4 382 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 ACOT7O00154 380 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 ABLIM1O14639 778 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 LILRB3O75022 631 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 ENDOUP21128 410 aaKnown RBP13.05□□□□□ -0.32
GPC6-201ENST00000377047 FGF13Q92913 245 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 TRNAU1APQ9NX07 287 aaKnown RBP13.05□□□□□ -0.32
GPC6-201ENST00000377047 PMF1-BGLAPU3KQ54 211 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 MBLAC1A4D2B0 266 aaPredicted RBP13.05□□□□□ -0.32
GPC6-201ENST00000377047 RFPL1O75677 317 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 H2BFMP0C1H6 154 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 CXCL12P48061 93 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 CLDN2P57739 230 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 SIM1P81133 766 aaPredicted RBP13.05□□□□□ -0.32
GPC6-201ENST00000377047 OR4D1Q15615 310 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 C18orf21Q32NC0 220 aaPredicted RBP13.05□□□□□ -0.32
GPC6-201ENST00000377047 TCTE1Q5JU00 501 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 OR8K3Q8NH51 312 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 OR52P1PQ8NH57 321 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 SCRN2Q96FV2 425 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 TMA7Q9Y2S6 64 aaKnown RBP13.05□□□□□ -0.32
GPC6-201ENST00000377047 UNC119BA6NIH7 251 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 CLDN25C9JDP6 229 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 KCNJ13O60928 360 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 ADORA3P0DMS8 318 aa13.05□□□□□ -0.32
GPC6-201ENST00000377047 RPS26P62854 115 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms