RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 CDKN3Q16667 212 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 PYDC2Q56P42 97 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 TCEAL5Q5H9L2 206 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 RNF165Q6ZSG1 346 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 OR9Q2Q8NGE9 314 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 TESCQ96BS2 214 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 C1QTNF7Q9BXJ2 289 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 ZDHHC6Q9H6R6 413 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 NDUFAF4Q9P032 175 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 TRPS1Q9UHF7 1281 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 POLHQ9Y253 713 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 CLCA3PQ9Y6N3 262 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 A0A1W2PQL4 384 aaPredicted RBP12.34□□□□□ -0.43
MSH5-204ENST00000375755 SUV39H1O43463 412 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 TSC22D2O75157 780 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 EPN2O95208 641 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 TRBC1P01850 177 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 PDGFAP04085 211 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 CA3P07451 260 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 GSTM1P09488 218 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 TSPAN19P0C672 248 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 CTRB1P17538 263 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 TAGLNQ01995 201 aaKnown RBP12.34□□□□□ -0.43
MSH5-204ENST00000375755 DUOXA1Q1HG43 343 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 CTRB2Q6GPI1 263 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 MBOAT1Q6ZNC8 495 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 GPR155Q7Z3F1 870 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 LGI4Q8N135 537 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 SYNPOQ8N3V7 929 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 GDPD1Q8N9F7 314 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 SPPL2AQ8TCT8 520 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 MAL2Q969L2 176 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 MARVELD3Q96A59 401 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 TMEM245Q9H330 911 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 ZFYVE1Q9HBF4 777 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 IL26Q9NPH9 171 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 MBD1Q9UIS9 605 aaPredicted RBP12.34□□□□□ -0.43
MSH5-204ENST00000375755 MAFFQ9ULX9 164 aa12.34□□□□□ -0.43
MSH5-204ENST00000375755 LSM2Q9Y333 95 aaKnown RBP12.34□□□□□ -0.43
MSH5-204ENST00000375755 UPK3BL1B0FP48 263 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 UPK3BL2E5RIL1 263 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 CDRT1O95170 752 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 PRAMEF1O95521 474 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 CPSF4O95639 269 aaKnown RBP12.33□□□□□ -0.44
MSH5-204ENST00000375755 BPIP17213 487 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 HMGCLP35914 325 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 KIR3DL1P43629 444 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 CDH12P55289 794 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 EXOC3L2Q2M3D2 409 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 CCNJQ5T5M9 372 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 CLECL1Q8IZS7 167 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 CPA6Q8N4T0 437 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 OR2AP1Q8NGE2 309 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 OR4C15Q8NGM1 316 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 RSPRY1Q96DX4 576 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 C17orf62Q9BQA9 187 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 P2RY12Q9H244 342 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 MCUBQ9NWR8 336 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 CNOT2Q9NZN8 540 aaKnown RBP12.33□□□□□ -0.44
MSH5-204ENST00000375755 CD84Q9UIB8 345 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 NDRG2Q9UN36 371 aaKnown RBP12.33□□□□□ -0.44
MSH5-204ENST00000375755 PADI2Q9Y2J8 665 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 SNTNA6NMZ2 147 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 TRIM77I1YAP6 450 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 OR7A10O76100 309 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 CCNB2O95067 398 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 EBLN1P0CF75 366 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 ANXA8P13928 327 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 VIPR2P41587 438 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 MAP2K3P46734 347 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 PCDH1Q08174 1060 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 SERPINA9Q86WD7 417 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 OR8H1Q8NGG4 311 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 CREB3L4Q8TEY5 395 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 APIPQ96GX9 242 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 HHIPQ96QV1 700 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 NTMT1Q9BV86 223 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 ING3Q9NXR8 418 aa12.33□□□□□ -0.44
MSH5-204ENST00000375755 SMIM30A4D0T7 59 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 MAGEB17A8MXT2 336 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 PLD2O14939 933 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 PDPK1O15530 556 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 CSO75390 466 aaKnown RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 TNFRSF21O75509 655 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 PRPS2P11908 318 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 GLULP15104 373 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 ZNF250P15622 560 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 PSMA3P25788 255 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 PTGER3P43115 390 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 MAN2A2P49641 1150 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 DGKEP52429 567 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 AP1S1P61966 158 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 FOXD4Q12950 439 aaPredicted RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 HNRNPA0Q13151 305 aaKnown RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 PTGES3Q15185 160 aaKnown RBP12.32□□□□□ -0.44
MSH5-204ENST00000375755 ADIPOR2Q86V24 386 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 GPR65Q8IYL9 337 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 CHTF18Q8WVB6 975 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 HERVK_113Q902F9 699 aa12.32□□□□□ -0.44
MSH5-204ENST00000375755 IRF7Q92985 503 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms