RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 RPH3AQ9Y2J0 694 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-203ENST00000375604 GSRP00390 522 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 PFKLP17858 780 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 ACADVLP49748 655 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 ARF3P61204 181 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-203ENST00000375604 ARF1P84077 181 aaKnown RBP16.45■□□□□ 0.22
MCF2L-203ENST00000375604 SMIM14Q96QK8 99 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 POU2F3Q9UKI9 436 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 H3BNX3 289 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 ALDOAP04075 364 aaKnown RBP16.45■□□□□ 0.22
MCF2L-203ENST00000375604 GSTM3P21266 225 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 ECH1Q13011 328 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 REEP3Q6NUK4 255 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 RNF111Q6ZNA4 994 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 ASB12Q8WXK4 309 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 KCNJ9Q92806 393 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 SLCO2A1Q92959 643 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 PDE7BQ9NP56 450 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 DZANK1Q9NVP4 752 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 SQORQ9Y6N5 450 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 OR6C70A6NIJ9 312 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 FAM171A2A8MVW0 826 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 PROM1O43490 865 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 S100A6P06703 90 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 KCNC1P48547 511 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 HNRNPA0Q13151 305 aaKnown RBP16.45■□□□□ 0.22
MCF2L-203ENST00000375604 ANKDD1AQ495B1 522 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 C6orf136Q5SQH8 315 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 TMEM151BQ8IW70 566 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 PNPLA2Q96AD5 504 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 PCDHGA6Q9Y5G7 932 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 BMPR1AP36894 532 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 MAP4K2Q12851 820 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 GAS6Q14393 721 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 LRRC37A5PQ49AS3 106 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 LMNTD1Q8N9Z9 388 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 ZSCAN1Q8NBB4 408 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 CA5BQ9Y2D0 317 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 PHRF1Q9P1Y6 1649 aaKnown RBP16.45■□□□□ 0.22
MCF2L-203ENST00000375604 NWD2Q9ULI1 1742 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 SLC6A6P31641 620 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 DOC2AQ14183 400 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 TECRLQ5HYJ1 363 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 LIPKQ5VXJ0 399 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 GPALPP1Q8IXQ4 340 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 ZNF565Q8N9K5 539 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 ZNF717Q9BY31 904 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-203ENST00000375604 SH3BGRL2Q9UJC5 107 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 CMAHPQ9Y471 501 aa16.45■□□□□ 0.22
MCF2L-203ENST00000375604 SOCS5O75159 536 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 TIMP1P01033 207 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 THEGLP0DJG4 465 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 ACVR1BP36896 505 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 TMEM31Q5JXX7 168 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 POGLUT1Q8NBL1 392 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 MKLN1Q9UL63 735 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 SAGE2PA6NJ88 616 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 TSPAN4O14817 238 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 ENTPD6O75354 484 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 ADRB3P13945 408 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 GINS1Q14691 196 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 ENPP6Q6UWR7 440 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 WDR53Q7Z5U6 358 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-203ENST00000375604 OR5AR1Q8NGP9 310 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 RADILQ96JH8 1075 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 DEFB126Q9BYW3 111 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 HPF1Q9NWY4 346 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 NFS1Q9Y697 457 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 CYBAP13498 195 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 FAM189BP81408 668 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 LIPJQ5W064 366 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 CDHR3Q6ZTQ4 885 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 SLC22A16Q86VW1 577 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 PAQR7Q86WK9 346 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 PSKH2Q96QS6 385 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 ZNF226Q9NYT6 803 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 HTR3EA5X5Y0 456 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 SNAP29O95721 258 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 RAB2BQ8WUD1 216 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 STRA6Q9BX79 667 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 ACTR3BQ9P1U1 418 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 E2F3O00716 465 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 SRPRAP08240 638 aaKnown RBP16.44■□□□□ 0.22
MCF2L-203ENST00000375604 PEPDP12955 493 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 CRYZQ08257 329 aaKnown RBP16.44■□□□□ 0.22
MCF2L-203ENST00000375604 ATXN7L3Q14CW9 347 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-203ENST00000375604 LHFPL3Q86UP9 236 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 HSPA12BQ96MM6 686 aa16.44■□□□□ 0.22
MCF2L-203ENST00000375604 TIMM8BQ9Y5J9 83 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-203ENST00000375604 OR52A4PA6NMU1 304 aa16.43■□□□□ 0.22
MCF2L-203ENST00000375604 TSPAN9O75954 239 aa16.43■□□□□ 0.22
MCF2L-203ENST00000375604 SEMA4FO95754 770 aa16.43■□□□□ 0.22
MCF2L-203ENST00000375604 FXYD6P3P58550 94 aa16.43■□□□□ 0.22
MCF2L-203ENST00000375604 ZNF701Q9NV72 531 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-203ENST00000375604 FNIP2Q9P278 1114 aa16.43■□□□□ 0.22
MCF2L-203ENST00000375604 UNC119BA6NIH7 251 aa16.43■□□□□ 0.22
MCF2L-203ENST00000375604 LHCGRP22888 699 aa16.43■□□□□ 0.22
MCF2L-203ENST00000375604 FAM46AQ96IP4 442 aaKnown RBP16.43■□□□□ 0.22
MCF2L-203ENST00000375604 LMAN1LQ9HAT1 526 aa16.43■□□□□ 0.22
MCF2L-203ENST00000375604 NUP50Q9UKX7 468 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms