RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TMED9Q9BVK6 235 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 FBXO10Q9UK96 956 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 RHPN2P1A8MT19 583 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 CDK1P06493 297 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 TIA1P31483 386 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ARFRP1Q13795 201 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 GSG1LQ6UXU4 331 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 IQCF2Q8IXL9 164 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 METTL21AQ8WXB1 218 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 ELP4Q96EB1 424 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SLC2A13Q96QE2 648 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 RAD9AQ99638 391 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 SPO11Q9Y5K1 396 aa9.8□□□□□ -0.84
PTCH1-204ENST00000375290 NUDT7P0C024 238 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 IL4RP24394 825 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 WDSUB1Q8N9V3 476 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 GRHPRQ9UBQ7 328 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 WASHC1A8K0Z3 465 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 WASH3PC4AMC7 463 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 ZBTB48P10074 688 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-204ENST00000375290 EFNA1P20827 205 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-204ENST00000375290 ITPKBP27987 946 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 MFSD13AQ14CX5 517 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 WASH2PQ6VEQ5 465 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 GPR142Q7Z601 462 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 OR2AP1Q8NGE2 309 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF417Q8TAU3 575 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 TCRBV7S3A2A0A539 114 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 PCDH17O14917 1159 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 OR1F1O43749 312 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 CSTBP04080 98 aaKnown RBP9.79□□□□□ -0.84
PTCH1-204ENST00000375290 CYP17A1P05093 508 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 S100A8P05109 93 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 CARTPTQ16568 116 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 OR4F3Q6IEY1 312 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 YIPF7Q8N8F6 280 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 OR2T35Q8NGX2 323 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 BRINP2Q9C0B6 783 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 DNAJC15Q9Y5T4 150 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 KIF13AQ9H1H9 1805 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 C1orf226A1L170 272 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 UPP2O95045 317 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 GGT2P36268 569 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 MAGEA3P43357 314 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 LRP8Q14114 963 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 GALEQ14376 348 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 LDB1Q86U70 411 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-204ENST00000375290 TCEANCQ8N8B7 351 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 ASB12Q8WXK4 309 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 UTS2RQ9UKP6 389 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 SH2B3Q9UQQ2 575 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 POLHQ9Y253 713 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 SCDO00767 359 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 KCNC1P48547 511 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 HSD11B2P80365 405 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 SIAH1Q8IUQ4 282 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 OR9I1Q8NGQ6 314 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 CNN2Q99439 309 aaKnown RBP9.79□□□□□ -0.84
PTCH1-204ENST00000375290 MGAT4CQ9UBM8 478 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 NPC1O15118 1278 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 VSX2P58304 361 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-204ENST00000375290 MLLT1Q03111 559 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-204ENST00000375290 MICAQ29983 383 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 GTF2IRD2BQ6EKJ0 949 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 GTF2IRD2Q86UP8 949 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 EMC7Q9NPA0 242 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 B3GAT2Q9NPZ5 323 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 CACNG2Q9Y698 323 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 A0A1W2PQL4 384 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-204ENST00000375290 CELP19835 753 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 ECI1P42126 302 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 DHRS4L2Q6PKH6 230 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 GTPBP8Q8N3Z3 284 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-204ENST00000375290 OR5T3Q8NGG3 340 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 C16orf58Q96GQ5 468 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 GALPQ9UBC7 116 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 PRODH2Q9UF12 536 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 ZFP37Q9Y6Q3 630 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-204ENST00000375290 ENPP4Q9Y6X5 453 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 NARSO43776 548 aaKnown RBP9.79□□□□□ -0.84
PTCH1-204ENST00000375290 NDUFV2P19404 249 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 RAB3BP20337 219 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 HOXD13P35453 343 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 TMEM234Q8WY98 164 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 RAB7BQ96AH8 199 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 SEMA4CQ9C0C4 833 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 B3GNT4Q9C0J1 378 aa9.79□□□□□ -0.84
PTCH1-204ENST00000375290 TTC24A2A3L6 582 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 CLDN5O00501 218 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 EGFP01133 1207 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 CLIP4Q8N3C7 705 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 WDR48Q8TAF3 677 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 GPR151Q8TDV0 419 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 OR51V1Q9H2C8 321 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 KCNK13Q9HB14 408 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 RAB9BQ9NP90 201 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 EQTNQ9NQ60 294 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 SLC16A6O15403 523 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 DUSP11O75319 330 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms