RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 MANEAQ5SRI9 462 aa16.58■□□□□ 0.24
SSBP3-203ENST00000371319 INTS11Q5TA45 600 aaKnown RBP16.58■□□□□ 0.24
SSBP3-203ENST00000371319 LYSMD4Q5XG99 296 aa16.58■□□□□ 0.24
SSBP3-203ENST00000371319 PMS2CLQ68D20 193 aa16.58■□□□□ 0.24
SSBP3-203ENST00000371319 TMEM214Q6NUQ4 689 aaKnown RBP16.58■□□□□ 0.24
SSBP3-203ENST00000371319 ABHD13Q7L211 337 aa16.58■□□□□ 0.24
SSBP3-203ENST00000371319 SPRED1Q7Z699 444 aa16.58■□□□□ 0.24
SSBP3-203ENST00000371319 GALNT10Q86SR1 603 aa16.58■□□□□ 0.24
SSBP3-203ENST00000371319 C11orf65Q8NCR3 313 aa16.58■□□□□ 0.24
SSBP3-203ENST00000371319 PYURFQ96I23 114 aa16.58■□□□□ 0.24
SSBP3-203ENST00000371319 TMEM38AQ9H6F2 299 aa16.58■□□□□ 0.24
SSBP3-203ENST00000371319 FAF1Q9UNN5 650 aaPredicted RBP16.58■□□□□ 0.24
SSBP3-203ENST00000371319 SCN3AQ9NY46 2000 aa16.58■□□□□ 0.24
SSBP3-203ENST00000371319 A0A1B0GTW7 788 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 SLC9B1P1A6NJY1 282 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 H0YJX3 145 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 SOCS2O14508 198 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 ACOX3O15254 700 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 ZSCAN9O15535 394 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-203ENST00000371319 PRSS23O95084 383 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 SEMG1P04279 462 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 EIF2S1P05198 315 aaKnown RBP16.57■□□□□ 0.24
SSBP3-203ENST00000371319 ALOX12P18054 663 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 NTSP30990 170 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 DHPSP49366 369 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-203ENST00000371319 CRYBA2P53672 197 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 TNFRSF17Q02223 184 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 RBBP4Q09028 425 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 BNIP3Q12983 259 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 ZNF750Q32MQ0 723 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 DEFB134Q4QY38 66 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 PPP4R4Q6NUP7 873 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 IRGCQ6NXR0 463 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 CBLL1Q75N03 491 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 MAML2Q8IZL2 1156 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-203ENST00000371319 SLC25A45Q8N413 288 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 DNAJC22Q8N4W6 341 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 ZNF655Q8N720 491 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-203ENST00000371319 CSNK1A1LQ8N752 337 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 SUN3Q8TAQ9 357 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 EDAQ92838 391 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 CNRIP1Q96F85 164 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-203ENST00000371319 ZNF597Q96LX8 424 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 C10orf90Q96M02 699 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 NECAB3Q96P71 396 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-203ENST00000371319 VCXQ9H320 206 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 YY1AP1Q9H869 796 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 NTN4Q9HB63 628 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 TMEM74BQ9NUR3 256 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 SAMD4AQ9UPU9 718 aaKnown RBP16.57■□□□□ 0.24
SSBP3-203ENST00000371319 CSNK1G3Q9Y6M4 447 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 RNF215Q9Y6U7 377 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 CACNA1IQ9P0X4 2223 aa16.57■□□□□ 0.24
SSBP3-203ENST00000371319 A0A1W2PS29 197 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 C7orf72A4D263 438 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 UPK1AO00322 258 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 ERAL1O75616 437 aaKnown RBP16.56■□□□□ 0.24
SSBP3-203ENST00000371319 CTSBP07858 339 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 GIMD1P0DJR0 217 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 ARAFP10398 606 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 NR2F6P10588 404 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 NCBP2P52298 156 aaKnown RBP eCLIP16.56■□□□□ 0.24
SSBP3-203ENST00000371319 LIM2P55344 173 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 VSX2P58304 361 aaPredicted RBP16.56■□□□□ 0.24
SSBP3-203ENST00000371319 FOLH1Q04609 750 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 CEBPEQ15744 281 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 C6orf132Q5T0Z8 1188 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 ZBTB49Q6ZSB9 765 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 EIF3MQ7L2H7 374 aaKnown RBP16.56■□□□□ 0.24
SSBP3-203ENST00000371319 PRSS41Q7RTY9 318 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 ARHGEF39Q8N4T4 335 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 OR10Q1Q8NGQ4 319 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 ZNF681Q96N22 645 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 BBS4Q96RK4 519 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 MAP3K3Q99759 626 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 ZNF639Q9UID6 485 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 PHF11Q9UIL8 331 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 RPS6KA6Q9UK32 745 aa16.56■□□□□ 0.24
SSBP3-203ENST00000371319 PDLIM1O00151 329 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 B3GALT2O43825 422 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 ZNF682O95780 498 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 C9P02748 559 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 EPHA4P54764 986 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 BIRC2Q13490 618 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 SCARB2Q14108 478 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 NRF1Q16656 503 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 DEFB110Q30KQ9 67 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 FAM92BQ6ZTR7 304 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 C6orf120Q7Z4R8 191 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 MCATQ8IVS2 390 aaKnown RBP16.55■□□□□ 0.24
SSBP3-203ENST00000371319 PACRGLQ8N7B6 248 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 ZFP28Q8NHY6 868 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 NFKBIDQ8NI38 313 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 GAB3Q8WWW8 586 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 C9orf16Q9BUW7 83 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 RAB26Q9ULW5 256 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 OAZ3Q9UMX2 235 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 DAPP1Q9UN19 280 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 ENTPD4Q9Y227 616 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 RHPN2P1A8MT19 583 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms