RNA–Protein interactions for RNA: ENST00000371219.2

RBM38-204, Transcript of RNA binding motif protein 38, human

TSL 2 BASIC

Gene RBM38, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM38-204	ENST00000371219	STON2	Q8WXE9	905 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	APIP	Q96GX9	242 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	CSF3R	Q99062	836 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	PELO	Q9BRX2	385 aa	Known RBP	13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	TUBB6	Q9BUF5	446 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	RBCK1	Q9BYM8	510 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	ZNF700	Q9H0M5	742 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	MEAF6	Q9HAF1	191 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	MYNN	Q9NPC7	610 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	PRTFDC1	Q9NRG1	225 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	P4HTM	Q9NXG6	502 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	ASIC5	Q9NY37	505 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	ATG4B	Q9Y4P1	393 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	PCSK5	Q92824	1860 aa		13.86	□□□□□ -0.19
RBM38-204	ENST00000371219	IGHV1-45	A0A0A0MS14	117 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	B4GALT2	O60909	372 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	SEC22B	O75396	215 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	SKAP2	O75563	359 aa	Predicted RBP	13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	CDC123	O75794	336 aa	Predicted RBP	13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	TGDS	O95455	350 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	AIFM1	O95831	613 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	LINC00032	P0C843	101 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	PRR35	P0CG20	571 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	PRKAR1A	P10644	381 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	COX6A1	P12074	109 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	ICAM2	P13598	275 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	DDX5	P17844	614 aa	Known RBP	13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	ASMT	P46597	345 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	RAE1	P78406	368 aa	Known RBP	13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	BTK	Q06187	659 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	AIMP2	Q13155	320 aa	Known RBP	13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	SLC13A2	Q13183	592 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	ATP1A4	Q13733	1029 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	HEPACAM	Q14CZ8	416 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	DCAF10	Q5QP82	559 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	NOXRED1	Q6NXP6	359 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	BORA	Q6PGQ7	559 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	RIPOR1	Q6ZS17	1223 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	SHISA6	Q6ZSJ9	500 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	NDUFAF7	Q7L592	441 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	ANKRD37	Q7Z713	158 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	FAM9C	Q8IZT9	166 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	CLEC1A	Q8NC01	280 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	OR2T11	Q8NH01	316 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	PTCHD1	Q96NR3	888 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	CCDC134	Q9H6E4	229 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	ADAP2	Q9NPF8	381 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	FBXL4	Q9UKA2	621 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	FBXW2	Q9UKT8	454 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	MAPRE3	Q9UPY8	281 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	PCDHA9	Q9Y5H5	950 aa		13.85	□□□□□ -0.19
RBM38-204	ENST00000371219	TLN1	Q9Y490	2541 aa	Known RBP	13.84	□□□□□ -0.19
RBM38-204	ENST00000371219		A0A1W2PR48	441 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	DNAJB6	O75190	326 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	ANXA4	P09525	319 aa	Predicted RBP	13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	FURIN	P09958	794 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	GALNS	P34059	522 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	SOX8	P57073	446 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	RPL38	P63173	70 aa	Known RBP	13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	PLIN5	Q00G26	463 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	COL9A2	Q14055	689 aa	Predicted RBP	13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	ELAVL1	Q15717	326 aa	Known RBP	13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	PDCD2	Q16342	344 aa	Predicted RBP	13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	EXT1	Q16394	746 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	FAM69B	Q5VUD6	431 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	OGFOD2	Q6N063	350 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	SCIMP	Q6UWF3	145 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	WDR75	Q8IWA0	830 aa	Known RBP	13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.84	□□□□□ -0.19	6e-6	■■■□□ 15.1
RBM38-204	ENST00000371219	APOBEC4	Q8WW27	367 aa	Known RBP	13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	TUBGCP3	Q96CW5	907 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	LPAR4	Q99677	370 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	SIKE1	Q9BRV8	207 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	TEX10	Q9NXF1	929 aa	Predicted RBP	13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	TUBD1	Q9UJT1	453 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	PSME2	Q9UL46	239 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	CLDN16	Q9Y5I7	305 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	PTGDR2	Q9Y5Y4	395 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	KCNMB2	Q9Y691	235 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	FAM208B	Q5VWN6	2430 aa		13.84	□□□□□ -0.19
RBM38-204	ENST00000371219	NSG1	A0A0A6YYJ2	146 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	FAM227A	F5H4B4	570 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	GPR75	O95800	540 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	GBA	P04062	536 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	PRPS2	P11908	318 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	COX7A2	P14406	83 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	ALOX15	P16050	662 aa	Predicted RBP	13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	MAOA	P21397	527 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	RPL3	P39023	403 aa	Known RBP	13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	HNRNPF	P52597	415 aa	Known RBP	13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	EFNA3	P52797	238 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	ERVK-8	P63133	956 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	STX4	Q12846	297 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	PCOLCE	Q15113	449 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	C6orf136	Q5SQH8	315 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	CPZ	Q66K79	652 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	PLAG1	Q6DJT9	500 aa		13.83	□□□□□ -0.2
RBM38-204	ENST00000371219	SLC48A1	Q6P1K1	146 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms