RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 CDK6Q00534 326 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 BCL2L1Q07817 233 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 HNRNPA0Q13151 305 aaKnown RBP16.71■□□□□ 0.27
CHUK-201ENST00000370397 OCLNQ16625 522 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 SLC25A30Q5SVS4 291 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 TMEM150AQ86TG1 271 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 CDC26Q8NHZ8 85 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 C2orf15Q8WU43 125 aaKnown RBP16.71■□□□□ 0.27
CHUK-201ENST00000370397 FOXJ1Q92949 421 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 NECTIN4Q96NY8 510 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 NIPAL2Q9H841 368 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 ZNF556Q9HAH1 456 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 ALG5Q9Y673 324 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 PSIP1O75475 530 aaKnown RBP16.71■□□□□ 0.27
CHUK-201ENST00000370397 ACADMP11310 421 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 ATN1P54259 1190 aaPredicted RBP16.71■□□□□ 0.27
CHUK-201ENST00000370397 MC1RQ01726 317 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 MXD1Q05195 221 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 PLCZ1Q86YW0 608 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 OR4D11Q8NGI4 311 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 SNAPC3Q92966 411 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 EXOSC4Q9NPD3 245 aaKnown RBP16.71■□□□□ 0.27
CHUK-201ENST00000370397 CLEC4EQ9ULY5 219 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 CKAP5Q14008 2032 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 SLCO2B1O94956 709 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 IRF1P10914 325 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 ELAVL4P26378 380 aaKnown RBP16.71■□□□□ 0.27
CHUK-201ENST00000370397 KCNC3Q14003 757 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 CD200R1LQ6Q8B3 271 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 ARMCX6Q7L4S7 300 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 SLC34A3Q8N130 599 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 TRIM63Q969Q1 353 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 SCRN2Q96FV2 425 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 VPS35Q96QK1 796 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 ACAD8Q9UKU7 415 aa16.71■□□□□ 0.27
CHUK-201ENST00000370397 OR6C70A6NIJ9 312 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 PLOD3O60568 738 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 CPNE3O75131 537 aaKnown RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 DDX5P17844 614 aaKnown RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 PKLRP30613 574 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 RIN1Q13671 783 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 HSDL2Q6YN16 418 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 Q6ZNB5 142 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 SYT14Q8NB59 555 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 HJURPQ8NCD3 748 aaPredicted RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 OR52I1Q8NGK6 324 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 GIMAP4Q9NUV9 329 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 ENOPH1Q9UHY7 261 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 DIMT1Q9UNQ2 313 aaKnown RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 AUP1Q9Y679 476 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 TRBC2A0A5B9 178 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 TRIM3O75382 744 aaPredicted RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 ASGR1P07306 291 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 GSTM1P09488 218 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 CTSAP10619 480 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 STK19P49842 368 aaPredicted RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 LRRC74AQ0VAA2 488 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 SPIN4Q56A73 249 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 CST9Q5W186 159 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 TCTN3Q6NUS6 607 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 PRSS55Q6UWB4 352 aaPredicted RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 ZNF730Q6ZMV8 503 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHUK-201ENST00000370397 OXR1Q8N573 874 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 ATP6V1C2Q8NEY4 427 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 SENP5Q96HI0 755 aaPredicted RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 NELL2Q99435 816 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 POLR2J2Q9GZM3 115 aaKnown RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 REEP4Q9H6H4 257 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 FABP12A6NFH5 140 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 FADS2P1A8MWK0 482 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 HIST1H2AGP0C0S8 130 aaPredicted RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 HIST1H2ADP20671 130 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 IKZF1Q13422 519 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 DDX39BQ13838 428 aaKnown RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 KIAA1841Q6NSI8 718 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 COMTD1Q86VU5 262 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 PEX5LQ8IYB4 626 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 OR5H6Q8NGV6 325 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 HIST1H2AHQ96KK5 128 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 DCLRE1CQ96SD1 692 aaKnown RBP16.7■□□□□ 0.26
CHUK-201ENST00000370397 HIST1H2AJQ99878 128 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 H2AFJQ9BTM1 129 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 ZSCAN32Q9NX65 697 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 SH2B3Q9UQQ2 575 aa16.7■□□□□ 0.26
CHUK-201ENST00000370397 STK25O00506 426 aa16.69■□□□□ 0.26
CHUK-201ENST00000370397 SH3BGRLO75368 114 aa16.69■□□□□ 0.26
CHUK-201ENST00000370397 SOX14O95416 240 aa16.69■□□□□ 0.26
CHUK-201ENST00000370397 MYCP01106 439 aaPredicted RBP16.69■□□□□ 0.26
CHUK-201ENST00000370397 SDC2P34741 201 aa16.69■□□□□ 0.26
CHUK-201ENST00000370397 ZNF630Q2M218 657 aaPredicted RBP16.69■□□□□ 0.26
CHUK-201ENST00000370397 C22orf42Q6IC83 251 aa16.69■□□□□ 0.26
CHUK-201ENST00000370397 FAM109AQ8N4B1 249 aa16.69■□□□□ 0.26
CHUK-201ENST00000370397 SLC22A12Q96S37 553 aa16.69■□□□□ 0.26
CHUK-201ENST00000370397 MARVELD1Q9BSK0 173 aa16.69■□□□□ 0.26
CHUK-201ENST00000370397 PRRG3Q9BZD7 231 aa16.69■□□□□ 0.26
CHUK-201ENST00000370397 FAM83DQ9H4H8 585 aa16.69■□□□□ 0.26
CHUK-201ENST00000370397 STOX2Q9P2F5 926 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms