RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 HERVK_113P63132 956 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 TNFRSF17Q02223 184 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 ZNF678Q5SXM1 525 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 C18orf63Q68DL7 685 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 LETMD1Q6P1Q0 360 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 MILR1Q7Z6M3 343 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 GPR180Q86V85 440 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 TMEM132CQ8N3T6 1108 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 SUN3Q8TAQ9 357 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.66■□□□□ 0.42
CKS1B-203ENST00000368439 NR4A3Q92570 626 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 CCDC77Q9BR77 488 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 CENPKQ9BS16 269 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 ERVK-6Q9BXR3 956 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 DEFB126Q9BYW3 111 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 PRM3Q9NNZ6 103 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 OLAHQ9NV23 265 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 MS4A12Q9NXJ0 267 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 EMCNQ9ULC0 261 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 SPACA6W5XKT8 324 aa17.66■□□□□ 0.42
CKS1B-203ENST00000368439 PROM1O43490 865 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 PRKRAO75569 313 aaKnown RBP17.65■□□□□ 0.42
CKS1B-203ENST00000368439 SEMA3DO95025 777 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 RASAL1O95294 804 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 GSTA1P08263 222 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 ARL1P40616 181 aaPredicted RBP17.65■□□□□ 0.42
CKS1B-203ENST00000368439 ID2Q02363 134 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 CLCQ05315 142 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 STX4Q12846 297 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 SERTAD2Q14140 314 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 TDRPQ86YL5 185 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 OR4N5Q8IXE1 308 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 CNPY4Q8N129 248 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 ZNF321PQ8N8H1 164 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 MYRIPQ8NFW9 859 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 UBLCP1Q8WVY7 318 aaPredicted RBP17.65■□□□□ 0.42
CKS1B-203ENST00000368439 PSMG3-AS1Q96PY0 264 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 TMEM237Q96Q45 408 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 SERPINI1Q99574 410 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 RPF2Q9H7B2 306 aaKnown RBP17.65■□□□□ 0.42
CKS1B-203ENST00000368439 PHF11Q9UIL8 331 aa17.65■□□□□ 0.42
CKS1B-203ENST00000368439 SPTAN1Q13813 2472 aaKnown RBP17.65■□□□□ 0.42
CKS1B-203ENST00000368439 UTP20O75691 2785 aaKnown RBP17.64■□□□□ 0.41
CKS1B-203ENST00000368439 A0A1W2PR48 441 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 AGFG2O95081 481 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 DDAH2O95865 285 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 OTCP00480 354 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 IFNA16P05015 189 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 SP1P08047 785 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 TAC1P20366 129 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 IMPDH1P20839 514 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 ATP5F1P24539 256 aaPredicted RBP17.64■□□□□ 0.41
CKS1B-203ENST00000368439 MST1P26927 711 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 PMP22Q01453 160 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 SRSF11Q05519 484 aaKnown RBP17.64■□□□□ 0.41
CKS1B-203ENST00000368439 RASA2Q15283 850 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 C10orf62Q5T681 223 aaPredicted RBP17.64■□□□□ 0.41
CKS1B-203ENST00000368439 NUDT13Q86X67 352 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
CKS1B-203ENST00000368439 MORN4Q8NDC4 146 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 OR14A16Q8NHC5 309 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 DNAJB8Q8NHS0 232 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 TRPC4APQ8TEL6 797 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 DAZLQ92904 295 aaKnown RBP17.64■□□□□ 0.41
CKS1B-203ENST00000368439 UCN3Q969E3 161 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 FARSBQ9NSD9 589 aaKnown RBP17.64■□□□□ 0.41
CKS1B-203ENST00000368439 LYARQ9NX58 379 aaKnown RBP17.64■□□□□ 0.41
CKS1B-203ENST00000368439 LRFN1Q9P244 771 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 TRPS1Q9UHF7 1281 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 ERRFI1Q9UJM3 462 aaPredicted RBP17.64■□□□□ 0.41
CKS1B-203ENST00000368439 CLCA3PQ9Y6N3 262 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 ICE1Q9Y2F5 2266 aa17.64■□□□□ 0.41
CKS1B-203ENST00000368439 ASPDHA6ND91 283 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 WIPF3A6NGB9 483 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 WASHC1A8K0Z3 465 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 C17orf105B2RV13 164 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 WISP2O76076 250 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 OR4F21O95013 312 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 FAM58BPP0C7Q3 252 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 STT3AP46977 705 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 HLCSP50747 726 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 PRKAA2P54646 552 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 OC90Q02509 493 aaPredicted RBP17.63■□□□□ 0.41
CKS1B-203ENST00000368439 FOLH1Q04609 750 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 IFT88Q13099 833 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 TTC19Q6DKK2 380 aaPredicted RBP17.63■□□□□ 0.41
CKS1B-203ENST00000368439 SLC25A25Q6KCM7 469 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 DGAT2L6Q6ZPD8 337 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 EPS8L3Q8TE67 593 aaKnown RBP17.63■□□□□ 0.41
CKS1B-203ENST00000368439 THAP3Q8WTV1 239 aaPredicted RBP17.63■□□□□ 0.41
CKS1B-203ENST00000368439 TANKQ92844 425 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 L3HYPDHQ96EM0 354 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 KLHL1Q9NR64 748 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 DCDC2Q9UHG0 476 aa17.63■□□□□ 0.41
CKS1B-203ENST00000368439 G3V2L1 256 aa17.62■□□□□ 0.41
CKS1B-203ENST00000368439 ZNF500O60304 480 aaPredicted RBP17.62■□□□□ 0.41
CKS1B-203ENST00000368439 ITGA10O75578 1167 aa17.62■□□□□ 0.41
CKS1B-203ENST00000368439 ZFAND5O76080 213 aa17.62■□□□□ 0.41
CKS1B-203ENST00000368439 SUPT7LO94864 414 aa17.62■□□□□ 0.41
CKS1B-203ENST00000368439 PDYNP01213 254 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms