RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 TSPAN17Q96FV3 270 aa12.53□□□□□ -0.4
PMF1-202ENST00000368277 SEC16BQ96JE7 1060 aa12.53□□□□□ -0.4
PMF1-202ENST00000368277 ENKD1Q9H0I2 346 aa12.53□□□□□ -0.4
PMF1-202ENST00000368277 OR51B5Q9H339 312 aa12.53□□□□□ -0.4
PMF1-202ENST00000368277 EHD1Q9H4M9 534 aa12.53□□□□□ -0.4
PMF1-202ENST00000368277 CNOT10Q9H9A5 744 aaKnown RBP12.53□□□□□ -0.4
PMF1-202ENST00000368277 GRHL1Q9NZI5 618 aa12.53□□□□□ -0.4
PMF1-202ENST00000368277 TXNDC16Q9P2K2 825 aa12.53□□□□□ -0.4
PMF1-202ENST00000368277 AKAP6Q13023 2319 aa12.53□□□□□ -0.4
PMF1-202ENST00000368277 LRRC14BA6NHZ5 514 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 WASHC1A8K0Z3 465 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 CDK2AP1O14519 115 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 SLC35E2BP0CK96 405 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 CPN2P22792 545 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 GSTM2P28161 218 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 PIGAP37287 484 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 SSR2P43308 183 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 RAB10P61026 200 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 ATP6V0D1P61421 351 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 IRF9Q00978 393 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 TFF3Q07654 80 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 PMPCAQ10713 525 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 KBTBD12Q3ZCT8 623 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 FAM219BQ5XKK7 198 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 C18orf63Q68DL7 685 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 ZNF585AQ6P3V2 769 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 ARHGAP11AQ6P4F7 1023 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 RAPH1Q70E73 1250 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 LRRC70Q7Z2Q7 622 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 CDH24Q86UP0 819 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 CCDC25Q86WR0 208 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 TMEM251Q8N6I4 163 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 ACBD4Q8NC06 268 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 OR5M3Q8NGP4 307 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 OR14A16Q8NHC5 309 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 ZNF721Q8TF20 911 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 NRGNQ92686 78 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 CDKL2Q92772 493 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 DAZLQ92904 295 aaKnown RBP12.52□□□□□ -0.41
PMF1-202ENST00000368277 UCN3Q969E3 161 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 KIAA1191Q96A73 305 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 MRRFQ96E11 262 aaKnown RBP12.52□□□□□ -0.41
PMF1-202ENST00000368277 KCNC2Q96PR1 638 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 CPNE1Q99829 537 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 SPOCK3Q9BQ16 436 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 EFCAB11Q9BUY7 163 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 CAPS2Q9BXY5 557 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 CD244Q9BZW8 370 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 TP63Q9H3D4 680 aaPredicted RBP12.52□□□□□ -0.41
PMF1-202ENST00000368277 IGSF5Q9NSI5 407 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 TUBA8Q9NY65 449 aaPredicted RBP12.52□□□□□ -0.41
PMF1-202ENST00000368277 VTI1BQ9UEU0 232 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 SPG11Q96JI7 2443 aa12.52□□□□□ -0.41
PMF1-202ENST00000368277 ATP6AP2A0A1C7CYW4 349 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 ACOT7O00154 380 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 ATP6AP2O75787 350 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 TOXO94900 526 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 GLSO94925 669 aaPredicted RBP12.51□□□□□ -0.41
PMF1-202ENST00000368277 HIST1H1TP22492 207 aaPredicted RBP12.51□□□□□ -0.41
PMF1-202ENST00000368277 HNRNPH2P55795 449 aaKnown RBP12.51□□□□□ -0.41
PMF1-202ENST00000368277 ASPHQ12797 758 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 SNTB1Q13884 538 aaKnown RBP12.51□□□□□ -0.41
PMF1-202ENST00000368277 PAGE2BQ5JRK9 111 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 UBAP2Q5T6F2 1119 aaKnown RBP12.51□□□□□ -0.41
PMF1-202ENST00000368277 PRAMEF20Q5VT98 475 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 RTL4Q6ZR62 310 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 C3orf62Q6ZUJ4 267 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 FAM47EQ6ZV65 393 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 ISCA2Q86U28 154 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 MYLK4Q86YV6 388 aaPredicted RBP12.51□□□□□ -0.41
PMF1-202ENST00000368277 C9orf40Q8IXQ3 194 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 C17orf53Q8N3J3 647 aaPredicted RBP12.51□□□□□ -0.41
PMF1-202ENST00000368277 MORN4Q8NDC4 146 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 KCTD4Q8WVF5 259 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 RND1Q92730 232 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 NXNL1Q96CM4 212 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 C14orf79Q96F83 325 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 UBXN10Q96LJ8 280 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 SMC6Q96SB8 1091 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 ATOH8Q96SQ7 321 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 ERP44Q9BS26 406 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 CNPPD1Q9BV87 410 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 PITHD1Q9GZP4 211 aaPredicted RBP12.51□□□□□ -0.41
PMF1-202ENST00000368277 ZDHHC11Q9H8X9 412 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 LYRM4Q9HD34 91 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 NUDT4Q9NZJ9 180 aa12.51□□□□□ -0.41
PMF1-202ENST00000368277 DOCK7Q96N67 2140 aa12.5□□□□□ -0.41
PMF1-202ENST00000368277 A0A1W2PS29 197 aa12.5□□□□□ -0.41
PMF1-202ENST00000368277 NADKO95544 446 aaPredicted RBP12.5□□□□□ -0.41
PMF1-202ENST00000368277 ENDOUP21128 410 aaKnown RBP12.5□□□□□ -0.41
PMF1-202ENST00000368277 PIK3CGP48736 1102 aa12.5□□□□□ -0.41
PMF1-202ENST00000368277 PLTPP55058 493 aa12.5□□□□□ -0.41
PMF1-202ENST00000368277 FOLH1Q04609 750 aa12.5□□□□□ -0.41
PMF1-202ENST00000368277 TGM3Q08188 693 aa12.5□□□□□ -0.41
PMF1-202ENST00000368277 CALCOCO2Q13137 446 aa12.5□□□□□ -0.41
PMF1-202ENST00000368277 SLAMF1Q13291 335 aa12.5□□□□□ -0.41
PMF1-202ENST00000368277 LAPTM5Q13571 262 aa12.5□□□□□ -0.41
PMF1-202ENST00000368277 HIST2H2ACQ16777 129 aaPredicted RBP12.5□□□□□ -0.41
PMF1-202ENST00000368277 AP5B1Q2VPB7 878 aa12.5□□□□□ -0.41
PMF1-202ENST00000368277 GXYLT1Q4G148 440 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms