RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 GPSM3Q9Y4H4 160 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 SNX8Q9Y5X2 465 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 LYVE1Q9Y5Y7 322 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 PLXND1Q9Y4D7 1925 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 A0A0A6YYD5 115 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 CHURC1-FNTBB4DL54 471 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 H3BMQ9 156 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 ADAM23O75077 832 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 KLF8O95600 359 aaPredicted RBP13.32□□□□□ -0.28
USF1-202ENST00000368020 RHCEP18577 417 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 PSMB5P28074 263 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 NTSP30990 170 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 ALDH9A1P49189 494 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 IL1RL1Q01638 556 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 GNA13Q14344 377 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 SPDYE7PQ495Y7 208 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 CEACAM20Q6UY09 585 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 ADGRF3Q8IZF5 1079 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 OR52E1Q8NGJ3 308 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 CREB3L4Q8TEY5 395 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 MUL1Q969V5 352 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 SLC22A18Q96BI1 424 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 MOAP1Q96BY2 351 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 ERLEC1Q96DZ1 483 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 COG8Q96MW5 612 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 KCNC2Q96PR1 638 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 ZNF607Q96SK3 696 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 PIP5K1AQ99755 562 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 CXorf36Q9H7Y0 433 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 GPN2Q9H9Y4 310 aaPredicted RBP13.32□□□□□ -0.28
USF1-202ENST00000368020 EXD2Q9NVH0 621 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 OR6C2Q9NZP2 312 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 MMP17Q9ULZ9 603 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 NDRG2Q9UN36 371 aaKnown RBP13.32□□□□□ -0.28
USF1-202ENST00000368020 CDC14AQ9UNH5 594 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 SNX7Q9UNH6 387 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 KCNK6Q9Y257 313 aa13.32□□□□□ -0.28
USF1-202ENST00000368020 BDP1A6H8Y1 2624 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 FEZF1A0PJY2 475 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 PRSS38A1L453 326 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 LRIT2A6NDA9 550 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 TMEM229AB2RXF0 380 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 SH3BP5O60239 455 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 MITFO75030 526 aaPredicted RBP13.31□□□□□ -0.28
USF1-202ENST00000368020 DIRAS1O95057 198 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 IFNW1P05000 195 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 CCNA2P20248 432 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 CLK3P49761 638 aaKnown RBP13.31□□□□□ -0.28
USF1-202ENST00000368020 HMGA2P52926 109 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 SPIBQ01892 262 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 FZD5Q13467 585 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 DCTN2Q13561 401 aaKnown RBP13.31□□□□□ -0.28
USF1-202ENST00000368020 SLC9A5Q14940 896 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 ADPRMQ3LIE5 342 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 TJAP1Q5JTD0 557 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 GTF2IRD2BQ6EKJ0 949 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 DUS1LQ6P1R4 473 aaKnown RBP13.31□□□□□ -0.28
USF1-202ENST00000368020 GTF2IRD2Q86UP8 949 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 CROCCP3Q8IVE0 287 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 SIX5Q8N196 739 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 DEPDC4Q8N2C3 294 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 BPIFB6Q8NFQ5 453 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 OR10G2Q8NGC3 310 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 OR5AK3PQ8NH89 298 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 RPLP0P6Q8NHW5 317 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 SORBS1Q9BX66 1292 aaKnown RBP13.31□□□□□ -0.28
USF1-202ENST00000368020 DUSP21Q9H596 190 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 EBF1Q9UH73 591 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 MUTYHQ9UIF7 546 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 MOSPD1Q9UJG1 213 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 ACSL6Q9UKU0 697 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 ENPP4Q9Y6X5 453 aa13.31□□□□□ -0.28
USF1-202ENST00000368020 A0A1W2PQF6 199 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 PRR23AA6NEV1 266 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 E9PQ18 207 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 TOR1BO14657 336 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 B4GAT1O43505 415 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 ACADMP11310 421 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 HTR1BP28222 390 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 PPP2R1BP30154 601 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 XCR1P46094 333 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 STXBP1P61764 594 aaKnown RBP13.3□□□□□ -0.28
USF1-202ENST00000368020 ZXDAP98168 799 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 SIM2Q14190 667 aaPredicted RBP13.3□□□□□ -0.28
USF1-202ENST00000368020 CLCA4Q14CN2 919 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 MAD2L1BPQ15013 274 aaPredicted RBP13.3□□□□□ -0.28
USF1-202ENST00000368020 ZIC1Q15915 447 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 RPE65Q16518 533 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 MICAQ29983 383 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 KIAA1211LQ6NV74 962 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 TMEM64Q6YI46 380 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 TRIM69Q86WT6 500 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 OR2L3Q8NG85 312 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 SFXN5Q8TD22 340 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 PROX1Q92786 737 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 SIPA1Q96FS4 1042 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 LMAN1LQ9HAT1 526 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 LHX9Q9NQ69 397 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 SEMA3GQ9NS98 782 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 FAM170BA6NMN3 283 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms