RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 DLX3O60479 287 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 CCND3P30281 292 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 FXYD6P3P58550 94 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 TUSC3Q13454 348 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLAMF9Q96A28 289 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 WDR77Q9BQA1 342 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 A0A0G2JMP0 313 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 RPS10-NUDT3A0A1W2PQS6 291 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 NCR1O76036 304 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 FGF3P11487 239 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 ADH7P40394 386 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 RPS10P46783 165 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 E2F1Q01094 437 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 ECH1Q13011 328 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 ARHGAP11AQ6P4F7 1023 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 OR4M2Q8NGB6 313 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 GALNT9Q9HCQ5 603 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 WDR45Q9Y484 360 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 FER1L5A0AVI2 2057 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 A0A1B0GVI7 797 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 HPGDSO60760 199 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 DLSTP36957 453 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 CAMLGP49069 296 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 CDKN1CP49918 316 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC36A3Q495N2 470 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZNF454Q8N9F8 522 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 REPS2Q8NFH8 660 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 NKD2Q969F2 451 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 MYO19Q96H55 970 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 YIPF4Q9BSR8 244 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 ENPP3O14638 875 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 CASRP41180 1078 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 P2RX3P56373 397 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 SFRP4Q6FHJ7 346 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 RASGRP3Q8IV61 690 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 USB1Q9BQ65 265 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 CCM2LQ9NUG4 571 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 A6NIN4 97 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 HPRP00739 348 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 GNRHRP30968 328 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 HK3P52790 923 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC51BQ86UW2 128 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 CHDHQ8NE62 594 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 NUSAP1Q9BXS6 441 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 METTL17Q9H7H0 456 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 HES2Q9Y543 173 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 EEF1E1-BLOC1S5C9J1V9 151 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 MAPK8P45983 427 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 PER3P56645 1201 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 OLIG2Q13516 323 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 NAT8LQ8N9F0 302 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 BBS1Q8NFJ9 593 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 SYT4Q9H2B2 425 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 TMEM181Q9P2C4 612 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 PTPRJQ12913 1337 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 HHLA1C9JL84 531 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 BRINP1O60477 761 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 EPHX1P07099 455 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 SMSP52788 366 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 GBX2P52951 348 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 HYAL4Q2M3T9 481 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 ACDQ96AP0 544 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 OSBPL2Q9H1P3 480 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 MAN2C1Q9NTJ4 1040 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 STSP08842 583 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 TAS2R50P59544 299 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 SMAD3P84022 425 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 PCBP2Q15366 365 aaKnown RBP eCLIP10.67□□□□□ -0.72e-6■■■■■ 64
CDC42BPA-205ENST00000366769 NINJ1Q92982 152 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 FAM83CQ9BQN1 747 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 TMEM2Q9UHN6 1383 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 J3QLW9 94 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 SAP18O00422 153 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZNF19P17023 458 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 CFL1P23528 166 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 OR6M1Q8NGM8 313 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 BORCS6Q96GS4 357 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 MYO16Q9Y6X6 1858 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 ROBO3Q96MS0 1386 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 ADH1AP07327 375 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 CHRNA6Q15825 494 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 EIF5AL1Q6IS14 154 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 BEND7Q8N7W2 519 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 CRAMP1Q96RY5 1269 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 FAM86C1Q9NVL1 165 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 AIPO00170 330 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 CH25HO95992 272 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 CMPK1P30085 196 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 CTHP32929 405 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 GNPDA1P46926 289 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 SBK1Q52WX2 424 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 PIM3Q86V86 326 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 OR10K1Q8NGX5 313 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 FCAMRQ8WWV6 532 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 C10orf90Q96M02 699 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 ARHGAP9Q9BRR9 750 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 FBXO5Q9UKT4 447 aa10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 TARBP1Q13395 1621 aaKnown RBP10.66□□□□□ -0.7
CDC42BPA-205ENST00000366769 CPS1P31327 1500 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms