RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 RPS6KB2Q9UBS0 482 aa13.58□□□□□ -0.23
SIRPA-202ENST00000358771 GREB1Q4ZG55 1949 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 TLR4O00206 839 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 BCAS1O75363 584 aaPredicted RBP13.58□□□□□ -0.24
SIRPA-202ENST00000358771 IGHA2P01877 340 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 KRT8P05787 483 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 LAMP2P13473 410 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 EPHA2P29317 976 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 RAB28P51157 221 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 CLCA4Q14CN2 919 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 FAM83HQ6ZRV2 1179 aaPredicted RBP13.58□□□□□ -0.24
SIRPA-202ENST00000358771 USP30Q70CQ3 517 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 SNX29P2Q8IUI4 249 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 C10orf111Q8N326 155 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.58□□□□□ -0.24
SIRPA-202ENST00000358771 LGR4Q9BXB1 951 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 ABCB9Q9NP78 766 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 GIN1Q9NXP7 522 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 DKK3Q9UBP4 350 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 ANTXRLA6NF34 631 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 TFECO14948 347 aaPredicted RBP13.58□□□□□ -0.24
SIRPA-202ENST00000358771 RPS21P63220 83 aaKnown RBP13.58□□□□□ -0.24
SIRPA-202ENST00000358771 KCNC4Q03721 635 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 EMX1Q04741 257 aaPredicted RBP13.58□□□□□ -0.24
SIRPA-202ENST00000358771 DNASE1L3Q13609 305 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 CAMK1Q14012 370 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 TSTQ16762 297 aaKnown RBP13.58□□□□□ -0.24
SIRPA-202ENST00000358771 LEXMQ3ZCV2 418 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 PDZD3Q86UT5 571 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 KLHDC8AQ8IYD2 350 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 UBE2J2Q8N2K1 259 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 OR8J2Q8NGG1 315 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 SETD7Q8WTS6 366 aaKnown RBP13.58□□□□□ -0.24
SIRPA-202ENST00000358771 OR5P2Q8WZ92 322 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 CCDC115Q96NT0 180 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 PIP5K1AQ99755 562 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 POLE4Q9NR33 117 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 TMEM9Q9P0T7 183 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 SLC23A2Q9UGH3 650 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 IL20RAQ9UHF4 553 aa13.58□□□□□ -0.24
SIRPA-202ENST00000358771 PCDH17O14917 1159 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 C1QCP02747 245 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 PSMA1P25786 263 aaKnown RBP13.57□□□□□ -0.24
SIRPA-202ENST00000358771 GSTM2P28161 218 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 KIAA0040Q15053 153 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 ZNF829Q3KNS6 432 aaPredicted RBP13.57□□□□□ -0.24
SIRPA-202ENST00000358771 GHDCQ8N2G8 530 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 FAM46DQ8NEK8 389 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 OR56A3Q8NH54 315 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 GPR151Q8TDV0 419 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 COX4I2Q96KJ9 171 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 UCK2Q9BZX2 261 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 SPNS1Q9H2V7 528 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 NKX2-4Q9H2Z4 354 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 SNTG1Q9NSN8 517 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 TRIOBPQ9H2D6 2365 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 CACNA1IQ9P0X4 2223 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 CASP8AP2Q9UKL3 1982 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 CCDC159P0C7I6 412 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 TMBIM6P55061 237 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 GRSF1Q12849 480 aaKnown RBP eCLIP13.57□□□□□ -0.24
SIRPA-202ENST00000358771 MTAPQ13126 283 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 VEZF1Q14119 521 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 PRSS58Q8IYP2 241 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 RPL3LQ92901 407 aaKnown RBP13.57□□□□□ -0.24
SIRPA-202ENST00000358771 MTERF3Q96E29 417 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 ZNF300Q96RE9 604 aaPredicted RBP13.57□□□□□ -0.24
SIRPA-202ENST00000358771 ITPAQ9BY32 194 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 WDR12Q9GZL7 423 aaKnown RBP13.57□□□□□ -0.24
SIRPA-202ENST00000358771 BTNL2Q9UIR0 455 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 WASHC1A8K0Z3 465 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 RNASET2O00584 256 aaKnown RBP13.57□□□□□ -0.24
SIRPA-202ENST00000358771 KIAA0355O15063 1070 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 KHKP50053 298 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 DCDC1P59894 354 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 ADARB1P78563 741 aaKnown RBP13.57□□□□□ -0.24
SIRPA-202ENST00000358771 SIM1P81133 766 aaPredicted RBP13.57□□□□□ -0.24
SIRPA-202ENST00000358771 HYAL2Q12891 473 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 IL18R1Q13478 541 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 ZNF385BQ569K4 471 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 KIAA1161Q6NSJ0 714 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 WASH2PQ6VEQ5 465 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 VN1R5Q7Z5H4 357 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 SLC9B2Q86UD5 537 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 TSPYL5Q86VY4 417 aaPredicted RBP13.57□□□□□ -0.24
SIRPA-202ENST00000358771 IQCF1Q8N6M8 205 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 IPCEF1Q8WWN9 437 aaPredicted RBP13.57□□□□□ -0.24
SIRPA-202ENST00000358771 S100ZQ8WXG8 99 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 LGALS12Q96DT0 336 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 TBX5Q99593 518 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 SAGE1Q9NXZ1 904 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 LRRC37A2A6NM11 1700 aa13.57□□□□□ -0.24
SIRPA-202ENST00000358771 SLC22A1O15245 554 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 PRAMEF4O60810 478 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 CDC123O75794 336 aaPredicted RBP13.56□□□□□ -0.24
SIRPA-202ENST00000358771 SNX4O95219 450 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 RPLP0P05388 317 aaKnown RBP13.56□□□□□ -0.24
SIRPA-202ENST00000358771 RBBP4Q09028 425 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 IRF4Q15306 451 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 ANKDD1AQ495B1 522 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms