RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 MRPL21Q7Z2W9 205 aaKnown RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 RSC1A1Q92681 617 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 KCTD15Q96SI1 283 aaPredicted RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 NANOGQ9H9S0 305 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 TPT1P8Q9HAU6 139 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 FBXO5Q9UKT4 447 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 KLHL33A6NCF5 533 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 MPZL2O60487 215 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 GMDSO60547 372 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 NXPH3O95157 252 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 MEF2AQ02078 507 aaPredicted RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 PTGR1Q14914 329 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 MEX3BQ6ZN04 569 aaKnown RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 SYT4Q9H2B2 425 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 ZBTB26Q9HCK0 441 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 SRA1Q9HD15 236 aaKnown RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 PNPLA3Q9NST1 481 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 COL20A1Q9P218 1284 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 PPLO60437 1756 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 MAP2K7O14733 419 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 LIASO43766 372 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 MAS1P04201 325 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 C8GP07360 202 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 NAA10P41227 235 aaPredicted RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 TUBA3CQ13748 450 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 HEPHL1Q6MZM0 1159 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 Q6ZVU0 165 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 ZNF584Q8IVC4 421 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 ZDHHC21Q8IVQ6 265 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 OR4N5Q8IXE1 308 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 PROKR1Q8TCW9 393 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 SLC22A17Q8WUG5 538 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 GKN1Q9NS71 199 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 A0A1W2PQ09 198 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 PRORSD1PA6NEY8 169 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 TMEM225BP0DP42 221 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 SMPD1P17405 629 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 RPL7P18124 248 aaKnown RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 TM4SF1P30408 202 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 CAMLGP49069 296 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 DSTNP60981 165 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 RAB31Q13636 194 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 SMAD2Q15796 467 aaKnown RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 NUDT13Q86X67 352 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 REM2Q8IYK8 340 aaPredicted RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 FTMTQ8N4E7 242 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 TRAM1L1Q8N609 369 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 STYXQ8WUJ0 223 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 DUSP26Q9BV47 211 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 DPCDQ9BVM2 203 aaPredicted RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 CPEB1Q9BZB8 566 aaKnown RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 POLR2J3Q9H1A7 115 aaKnown RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 MAGEE1Q9HCI5 957 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 TMEM184CQ9NVA4 438 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 USP32Q8NFA0 1604 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 LMTK2Q8IWU2 1503 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 APOA2P02652 100 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 ZNF28P17035 718 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 SRP14P37108 136 aaKnown RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 SLC9A3P48764 834 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 NCS1P62166 190 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 GNA12Q03113 381 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 CLCQ05315 142 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 ASTE1Q2TB18 679 aaPredicted RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 NIPAL1Q6NVV3 410 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 POTEHQ6S545 545 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 LRRN1Q6UXK5 716 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 RNF111Q6ZNA4 994 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 ARCQ7LC44 396 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 OR1S1Q8NH92 325 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 DNAJC19Q96DA6 116 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 S100A16Q96FQ6 103 aaKnown RBP9.4□□□□□ -0.9
CHD3-202ENST00000358181 CASD1Q96PB1 797 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 KATNBL1Q9H079 304 aa9.4□□□□□ -0.9
CHD3-202ENST00000358181 FAM230AA0A1W2PPH8 454 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 TLR4O00206 839 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 LGALS8O00214 317 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 CXCR6O00574 342 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 OR2J3O76001 311 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 TP53P04637 393 aaPredicted RBP9.4□□□□□ -0.91
CHD3-202ENST00000358181 CD48P09326 243 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 BMP6P22004 513 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 GABREP78334 506 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 BTBD16Q32M84 506 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 TMEM173Q86WV6 379 aaPredicted RBP9.4□□□□□ -0.91
CHD3-202ENST00000358181 ZNF695Q8IW36 515 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 CELF5Q8N6W0 485 aaKnown RBP9.4□□□□□ -0.91
CHD3-202ENST00000358181 OR51T1Q8NGJ9 327 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 ST7LQ8TDW4 575 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 AENQ8WTP8 325 aaKnown RBP9.4□□□□□ -0.91
CHD3-202ENST00000358181 MYNNQ9NPC7 610 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 SMCO4Q9NRQ5 59 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 PCDHGA7Q9Y5G6 932 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 SERTM2A0A1B0GWG4 89 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 A8MV72 311 aaPredicted RBP9.4□□□□□ -0.91
CHD3-202ENST00000358181 RNGTTO60942 597 aaKnown RBP9.4□□□□□ -0.91
CHD3-202ENST00000358181 DBHP09172 617 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 TFPTP0C1Z6 253 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 ADORA3P0DMS8 318 aa9.4□□□□□ -0.91
CHD3-202ENST00000358181 LMO2P25791 158 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms