RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TSC22D2O75157 780 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 CSTAP01040 98 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 OR52E8Q6IFG1 317 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 TRAF7Q6Q0C0 670 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 SLCO6A1Q86UG4 719 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 RIT1Q92963 219 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 RFKQ969G6 155 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMC6-201ENST00000351948 EMC8O43402 210 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 F3P13726 295 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 PLCXD2Q0VAA5 305 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 CCNIQ14094 377 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 IQCCQ4KMZ1 466 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 ERMP1Q7Z2K6 904 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 EID2Q8N6I1 236 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 SLC35C2Q9NQQ7 365 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 EIF3FO00303 357 aaPredicted RBP13.08□□□□□ -0.32
SMC6-201ENST00000351948 ERV3-1Q14264 604 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 CCSMST1Q4G0I0 132 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 KIAA0895LQ68EN5 471 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 GPAT4Q86UL3 456 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 TMEM203Q969S6 136 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 SLC6A18Q96N87 628 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 TSSK6Q9BXA6 273 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 C8orf4Q9NR00 106 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 MARK1Q9P0L2 795 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 DAPL1A0PJW8 107 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 TMEM202A6NGA9 273 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 INMTO95050 263 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 APOL3O95236 402 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 IGLV3-25P01717 112 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 MMP2P08253 660 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 PSMA1P25786 263 aaKnown RBP13.08□□□□□ -0.32
SMC6-201ENST00000351948 KDELR2P33947 212 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 TPMTP51580 245 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 ODF4Q2M2E3 257 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 C10orf62Q5T681 223 aaPredicted RBP13.08□□□□□ -0.32
SMC6-201ENST00000351948 FAM69BQ5VUD6 431 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 RNF111Q6ZNA4 994 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 NANOGNBQ7Z5D8 188 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 SPRED2Q7Z698 418 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 SATL1Q86VE3 508 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 ZNF740Q8NDX6 193 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 PROKR2Q8NFJ6 384 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 OR51A7Q8NH64 312 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 KCNN1Q92952 543 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 LDAHQ9H6V9 325 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 ANHXE9PGG2 379 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 C11orf98E9PRG8 122 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 TLR4O00206 839 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 ZNF821O75541 412 aaPredicted RBP13.08□□□□□ -0.32
SMC6-201ENST00000351948 SDC1P18827 310 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 RHAGQ02094 409 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 LRP8Q14114 963 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 RPE65Q16518 533 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 SPRED3Q2MJR0 410 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 NDUFAF6Q330K2 333 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 TMEM35AQ53FP2 167 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 ADIPOR2Q86V24 386 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 NLGN4XQ8N0W4 816 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 OR13H1Q8NG92 308 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 MCFD2Q8NI22 146 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 KCNN2Q9H2S1 579 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 PCDHB14Q9Y5E9 798 aa13.08□□□□□ -0.32
SMC6-201ENST00000351948 A0A075B6Q4 140 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 PGRMC2O15173 223 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 EEDO75530 441 aaKnown RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 RPP14O95059 124 aaKnown RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 BMP8BP34820 402 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 PUS10Q3MIT2 529 aaKnown RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 SFT2D3Q587I9 215 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 RPS26P11Q5JNZ5 115 aaPredicted RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 MZT2AQ6P582 158 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 BMP8AQ7Z5Y6 402 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 LAPTM4BQ86VI4 370 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMC6-201ENST00000351948 ZNF483Q8TF39 744 aaPredicted RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 SLC7A6OSQ96CW6 309 aaPredicted RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 WDR83Q9BRX9 315 aaKnown RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 RPP25Q9BUL9 199 aaKnown RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 PHF7Q9BWX1 381 aaPredicted RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 NEK6Q9HC98 313 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 DMRT3Q9NQL9 472 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 FAM53CQ9NYF3 392 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 ZNF726A6NNF4 738 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 GP1BBP13224 206 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 FPR1P21462 350 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 OR9A2Q8NGT5 310 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 PDXPQ96GD0 296 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 UCK2Q9BZX2 261 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 CXorf21Q9HAI6 301 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 SDHAF3Q9NRP4 125 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 MYO10Q9HD67 2058 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 DPPA5A6NC42 116 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 SOX1O00570 391 aaPredicted RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 TOR1BO14657 336 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 TLX3O43711 291 aaPredicted RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 TTC3P53804 2025 aa13.07□□□□□ -0.32
SMC6-201ENST00000351948 PRPF38BQ5VTL8 546 aaKnown RBP13.07□□□□□ -0.32
SMC6-201ENST00000351948 ENPP6Q6UWR7 440 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms