RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 PRRC1Q96M27 445 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ZNF582Q96NG8 517 aaPredicted RBP5.71□□□□□ -1.5
RFC1-201ENST00000349703 SYT11Q9BT88 431 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SEMA4CQ9C0C4 833 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 KATNBL1Q9H079 304 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SMURF1Q9HCE7 757 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 VSX1Q9NZR4 365 aaPredicted RBP5.71□□□□□ -1.5
RFC1-201ENST00000349703 ZNF225Q9UK10 706 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 CNTN6Q9UQ52 1028 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 RREB1Q92766 1687 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 PNMA8CA0A1B0GUJ8 204 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 A1L4Q6 167 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 CPNE6O95741 557 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 C8BP07358 591 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ADH4P08319 380 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 MATN1P21941 496 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 KDELR1P24390 212 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ALDH1B1P30837 517 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 MATKP42679 507 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ZNF132P52740 706 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 TMBIM6P55061 237 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 GPX6P59796 221 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SKP1P63208 163 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 PRKCZQ05513 592 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SLC3A1Q07837 685 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 GRAPQ13588 217 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SCARB2Q14108 478 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ZNF234Q14588 700 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 CEBPEQ15744 281 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ZNF699Q32M78 642 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SPANXN3Q5MJ09 141 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 RNASEKQ6P5S7 137 aaKnown RBP5.71□□□□□ -1.5
RFC1-201ENST00000349703 ZNF730Q6ZMV8 503 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 GBGT1Q8N5D6 347 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 GRAPLQ8TC17 118 aaPredicted RBP5.71□□□□□ -1.5
RFC1-201ENST00000349703 OIT3Q8WWZ8 545 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 RCN3Q96D15 328 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 PRMT6Q96LA8 375 aaPredicted RBP5.71□□□□□ -1.5
RFC1-201ENST00000349703 ALG12Q9BV10 488 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ITPAQ9BY32 194 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 PIGMQ9H3S5 423 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 TRAPPC4Q9Y296 219 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 FIS1Q9Y3D6 152 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 MYH3P11055 1940 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 A0A087WZ62 844 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 PLA2G6O60733 806 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SMPD2O60906 423 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 STX11O75558 287 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SLITRK3O94933 977 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 LDLRP01130 860 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 THRBP10828 461 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 GPD1P21695 349 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 EDNRBP24530 442 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ADAM17P78536 824 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SLC35F1Q5T1Q4 408 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 HIST2H3PS2Q5TEC6 136 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ARHGAP17Q68EM7 881 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SLC39A5Q6ZMH5 540 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SHFQ7M4L6 423 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 NAT8LQ8N9F0 302 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ASCC1Q8N9N2 400 aaKnown RBP5.71□□□□□ -1.5
RFC1-201ENST00000349703 OR7A2PQ8NGA2 310 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ASB9Q96DX5 294 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 BORCS6Q96GS4 357 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 RNF170Q96K19 258 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 STRA6Q9BX79 667 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SLC39A8Q9C0K1 460 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ANKHQ9HCJ1 492 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 MCUBQ9NWR8 336 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ZNF69Q9UC07 566 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ATRNL1Q5VV63 1379 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 A0A1W2PRB8 838 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 MRASO14807 208 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 UBDO15205 165 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 PTP4A3O75365 173 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 RECQL5O94762 991 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 C9P02748 559 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 PMCHP20382 165 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 CORO1AP31146 461 aaKnown RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 WNT3AP56704 352 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 CCNYL2Q5T2Q4 361 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 FAM102AQ5T9C2 384 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 GPAT2Q6NUI2 795 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 PARGQ86W56 976 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 IFNEQ86WN2 208 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 LINC00346Q8IVM7 164 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 LINC00518Q8N0U6 118 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 CFAP52Q8N1V2 620 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 INO80EQ8NBZ0 244 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 NETO2Q8NC67 525 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 OR2G2Q8NGZ5 317 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 SGK3Q96BR1 496 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 ADOQ96SZ5 270 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 MTG1Q9BT17 334 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 GPR88Q9GZN0 384 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 TRIM45Q9H8W5 580 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 SPHK2Q9NRA0 654 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 UTS2RQ9UKP6 389 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 WASF3Q9UPY6 502 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 TNS2Q63HR2 1409 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms